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3OHH

Crystal structure of beta-site app-cleaving enzyme 1 (bace-wt) complex with bms-681889 aka n~1~-butyl-5-cyano- n~3~-((1s,2r)-1-(3,5-difluorobenzyl)-2-hydroxy-3-((3- methoxybenzyl)amino)propyl)-n~1~-methyl-1h-indole-1,3- dicarboxamide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Beta-secretase 1polymer45550220.52UniProt (P56817)
Pfam (PF00026)
Homo sapiens (human)Beta-site app cleaving enzyme 1, beta-site amyloid precursor protein cleaving enzyme 1, aspartyl protease 2, asp 2, asp2, membrane-associated aspartic protease 2, memapsin-2
2C, G
(A, B)
N~1~-butyl-5-cyano-N~3~-{(1S,2R)-1-(3,5-difluorobenzyl)-2-hydroxy-3-[(3-methoxybenzyl)amino]propyl}-N~1~-methyl-1H-indole-1,3-dicarboxamidenon-polymer617.72Chemie (3HH)
3D, H
(A, B)
SULFATE IONnon-polymer96.12Chemie (SO4)
4E, F, I
(A, B)
GLYCEROLnon-polymer92.13Chemie (GOL)
5J, K
(A, B)
waterwater18.01043Chemie (HOH)
Sequence modifications
A, B: 1 - 441 (UniProt: P56817)
PDBExternal DatabaseDetails
Met -13-expression tag
Ala -12-expression tag
Ser -11-expression tag
Met -10-expression tag
Thr -9-expression tag
Gly -8-expression tag
Gly -7-expression tag
Gln -6-expression tag
Gln -5-expression tag
Met -4-expression tag
Gly -3-expression tag
Arg -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight100441.0
Non-Polymers*Number of molecules7
Total formula weight1703.8
All*Total formula weight102144.8
*Water molecules are not included.

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PDB entries from 2025-07-30

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