3OBT
Crystal structure of Botulinum neurotoxin serotype D ligand binding domain in complex with N-Acetylneuraminic acid
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Botulinum neurotoxin type D | polymer | 434 | 50320.7 | 1 | UniProt (P19321) | Clostridium botulinum | BoNT/D, Bontoxilysin-D, Botulinum neurotoxin D light chain, Botulinum neurotoxin D heavy chain |
| 2 | B (A) | N-acetyl-beta-neuraminic acid | non-polymer | 309.3 | 1 | Chemie (SLB) PubChem (1807423) PubChem (906) PubChem (8565) PubChem (163606) PubChem (439197) PubChem (444885) PubChem (445063) PubChem (445727) PubChem (1549084) PubChem (5748928) PubChem (6398955) PubChem (6992095) PubChem (7059665) PubChem (7092680) PubChem (7092682) PubChem (7173826) PubChem (7569151) PubChem (10936453) PubChem (11370291) PubChem (11876108) PubChem (11908614) PubChem (13657114) PubChem (15560306) PubChem (15560307) PubChem (15560308) PubChem (15560310) PubChem (15560312) PubChem (15560313) PubChem (15560315) PubChem (15560316) PubChem (15560317) PubChem (16758151) PubChem (17757261) PubChem (20843074) PubChem (24801877) PubChem (26470719) PubChem (26470725) PubChem (36690637) PubChem (40429907) PubChem (40477531) PubChem (40785048) PubChem (42553514) PubChem (42553516) PubChem (42553518) PubChem (42553520) PubChem (44120039) PubChem (44338934) PubChem (45933901) PubChem (26470722) PubChem (49819355) PubChem (58392620) PubChem (656387) PubChem (5702294) PubChem (6560217) PubChem (7048542) PubChem (7173829) PubChem (57859521) PubChem (58341444) PubChem (145832226) PubChem (58545373) PubChem (15560314) PubChem (58964108) PubChem (59331136) PubChem (168364984) PubChem (67604154) PubChem (68257483) PubChem (68260278) PubChem (68315779) PubChem (70643192) PubChem (70666785) PubChem (70979316) PubChem (71299579) PubChem (71650744) PubChem (89869240) PubChem (89869500) PubChem (89869501) PubChem (89869502) PubChem (92354618) PubChem (93959067) PubChem (94016791) PubChem (95566316) PubChem (96562275) PubChem (102004932) PubChem (102145501) PubChem (117937408) PubChem (122374560) PubChem (124040735) PubChem (124490223) PubChem (126963458) PubChem (129672250) PubChem (130267610) PubChem (130330497) PubChem (132187635) PubChem (133688898) PubChem (134689626) PubChem (134973249) PubChem (135053795) PubChem (135055138) PubChem (139256539) PubChem (155021572) PubChem (156051160) PubChem (160911533) PubChem (160911534) PubChem (164670778) PubChem (166985445) PubChem (168314628) PubChem (168358112) PubChem (168358795) PubChem (168369824) PubChem (168370581) PubChem (168373659) PubChem (168375635) PubChem (173875492) PubChem (173910549) PubChem (173918449) | |||
| 3 | C, D, E, F, G... (A) | GLYCEROL | non-polymer | 92.1 | 11 | Chemie (GOL) PubChem (753) | |||
| 4 | N (A) | water | water | 18.0 | 317 | Chemie (HOH) |
Sequence modifications
A: 863 - 1276 (UniProt: P19321)
| PDB | External Database | Details |
|---|---|---|
| Met 856 | - | expression tag |
| Arg 857 | - | expression tag |
| Gly 858 | - | expression tag |
| Ser 859 | - | expression tag |
| Ala 860 | - | expression tag |
| Met 861 | - | expression tag |
| Ala 862 | - | expression tag |
| Pro 1277 | - | expression tag |
| Pro 1278 | - | expression tag |
| Thr 1279 | - | expression tag |
| Pro 1280 | - | expression tag |
| Gly 1281 | - | expression tag |
| Trp 1282 | - | expression tag |
| Ser 1283 | - | expression tag |
| His 1284 | - | expression tag |
| Pro 1285 | - | expression tag |
| Gln 1286 | - | expression tag |
| Phe 1287 | - | expression tag |
| Glu 1288 | - | expression tag |
| Lys 1289 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 50320.7 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 1322.3 | |
| All* | Total formula weight | 51643.0 |
