3O62
Nucleosome core particle modified with a cisplatin 1,3-cis-{Pt(NH3)2}2+-d(GpTpG) intrastrand cross-link
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E (A, E) | Histone H3.2 | polymer | 135 | 15303.9 | 2 | UniProt (P84233) Pfam (PF00125) | Xenopus laevis (African clawed frog) | |
2 | B, F (B, F) | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
3 | C, G (C, G) | Histone H2A type 1 | polymer | 128 | 13907.2 | 2 | UniProt (P06897) Pfam (PF00125) Pfam (PF16211) | Xenopus laevis (clawed frog common platanna platanna) | |
4 | D, H (D, H) | Histone H2B 1.1 | polymer | 122 | 13524.8 | 2 | UniProt (P02281) Pfam (PF00125) | Xenopus laevis (clawed frog common platanna platanna) | H2B1.1 |
5 | I (I) | DNA (146-MER) | polymer | 146 | 44739.7 | 1 | |||
6 | J (J) | DNA (146-MER) | polymer | 146 | 45370.0 | 1 | |||
7 | K (I) | Cisplatin | non-polymer | 300.0 | 1 | Chemie (CPT) |
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
C, G: 1 - 128 (UniProt: P06897)
D, H: 1 - 122 (UniProt: P02281)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | conflict |
PDB | External Database | Details |
---|---|---|
Arg 99 | Gly 100 | conflict |
Ser 123 | Ala 124 | conflict |
- | Ala 127 | deletion |
PDB | External Database | Details |
---|---|---|
Thr 29 | Ser 33 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 198107.8 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 300.0 | |
All* | Total formula weight | 198407.9 |