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3N3G

4-(3-Trifluoromethylphenyl)-pyrimidine-2-carbonitrile as cathepsin S inhibitors: N3, not N1 is critically important

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Cathepsin Spolymer21724006.92UniProt (P25774)
Pfam (PF00112)
Homo sapiens (human)
2C
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
3D
(A)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
4E, J
(A, B)
(E)-1-(6-{4-[3-(4-methylpiperazin-1-yl)propoxy]-3-(trifluoromethyl)phenyl}pyridin-2-yl)methaniminenon-polymer406.42Chemie (935)
5F
(A)
6-{4-[3-(4-methylpiperazin-1-yl)propoxy]-3-(trifluoromethyl)phenyl}pyridine-2-carbonitrilenon-polymer404.41Chemie (93N)
6G
(B)
SULFATE IONnon-polymer96.11Chemie (SO4)
7H, I
(B)
GLYCEROLnon-polymer92.12Chemie (GOL)
8K, L
(A, B)
waterwater18.0512Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight48013.9
Non-Polymers*Number of molecules8
Total formula weight1681.8
All*Total formula weight49695.7
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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