3MZW
HER2 extracelluar region with affinity matured 3-helix affibody ZHER2:342
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Tyrosine kinase-type cell surface receptor HER2 | polymer | 624 | 68794.1 | 1 | UniProt (P04626) Pfam (PF01030) Pfam (PF00757) Pfam (PF14843) In PDB | Homo sapiens (human) | Receptor tyrosine-protein kinase erbB-2, p185erbB2, Proto-oncogene c-ErbB-2, Proto-oncogene Neu, Metastatic lymph node gene 19 protein, MLN 19 |
2 | B | Immunoglobulin G-binding protein A | polymer | 58 | 6714.6 | 1 | UniProt (P38507) Pfam (PF02216) In PDB | Staphylococcus aureus | IgG-binding protein A, Staphylococcal protein A |
3 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
5 | water | water | 18.0 | 9 | Chemie (HOH) |
Sequence modifications
B: 1 - 58 (UniProt: P38507)
PDB | External Database | Details |
---|---|---|
Val 1 | Ala 212 | engineered mutation |
Met 9 | Gln 220 | engineered mutation |
Arg 10 | Gln 221 | engineered mutation |
Tyr 13 | Phe 224 | engineered mutation |
Trp 14 | Tyr 225 | engineered mutation |
Ala 17 | Leu 228 | engineered mutation |
Leu 18 | His 229 | engineered mutation |
Asn 24 | Glu 235 | engineered mutation |
Gln 25 | Glu 236 | engineered mutation |
Lys 27 | Arg 238 | engineered mutation |
Arg 28 | Asn 239 | engineered mutation |
Ala 29 | Gly 240 | engineered mutation |
Arg 32 | Gln 243 | engineered mutation |
Tyr 35 | Lys 246 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 75508.6 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 76375.5 |