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3MZE

Structure of penicillin-binding protein 5 from E.coli: cefoxitin acyl-enzyme complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
D-alanyl-D-alanine carboxypeptidase dacApolymer36339841.11UniProt (P0AEB2)
Pfam (PF00768)
Pfam (PF07943)
Escherichia coliDD-carboxypeptidase, DD-peptidase, Beta-lactamase, Penicillin-binding protein 5, PBP-5
2B
(A)
(2R)-5-[(carbamoyloxy)methyl]-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acidnon-polymer429.51Chemie (1QL)
3C, D, E, F
(A)
GLYCEROLnon-polymer92.14Chemie (GOL)
4G
(A)
waterwater18.0118Chemie (HOH)
Sequence modifications
A: 1 - 357 (UniProt: P0AEB2)
PDBExternal DatabaseDetails
Gly 358-SEE REMARK 999
Asp 359-SEE REMARK 999
Pro 360-SEE REMARK 999
Val 361-SEE REMARK 999
Ile 362-SEE REMARK 999
Asp 363-SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39841.1
Non-Polymers*Number of molecules5
Total formula weight797.8
All*Total formula weight40639.0
*Water molecules are not included.

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PDB entries from 2025-07-16

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