3MA7
Crystal structure of Cardiolipin bound to mouse CD1D
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C, A | T-cell surface glycoprotein CD1d1 | polymer | 285 | 32632.7 | 2 | UniProt (P11609) Pfam (PF16497) Pfam (PF07654) In PDB | Mus musculus (mouse) | |
2 | D, B | Beta-2 microglobulin | polymer | 99 | 11660.4 | 2 | UniProt (Q91XJ8) Pfam (PF07654) UniProt (by SIFTS) (P01887) In PDB | Mus musculus (mouse) | |
3 | E, F, G | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
4 | C, A | (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate | non-polymer | 1241.6 | 2 | Chemie (CD4) | |||
5 | C, A | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) | |||
6 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
7 | water | water | 18.0 | 157 | Chemie (HOH) |
Sequence modifications
C, A: 1 - 279 (UniProt: P11609)
PDB | External Database | Details |
---|---|---|
His 201 | Asp 219 | engineered mutation |
His 280 | - | expression tag |
His 281 | - | expression tag |
His 282 | - | expression tag |
His 283 | - | expression tag |
His 284 | - | expression tag |
His 285 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 88586.0 | |
Branched | Number of molecules | 3 |
Total formula weight | 1273.2 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 3217.3 | |
All* | Total formula weight | 93076.6 |