3M6R
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41M mutant in complex with actinonin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Peptide deformylase 1B | polymer | 193 | 22050.4 | 4 | UniProt (Q9FUZ2) Pfam (PF01327) | Arabidopsis thaliana (thale-cress) | PDF 1B, AtPDF1B, AtDEF2, Polypeptide deformylase |
| 2 | E, K, P, V (A, B, C, D) | ACTINONIN | non-polymer | 385.5 | 4 | Chemie (BB2) | |||
| 3 | AA, F, G, H, I... (D, A, B, C) | ZINC ION | non-polymer | 65.4 | 19 | Chemie (ZN) | |||
| 4 | BA, CA, DA, EA (A, B, C, D) | water | water | 18.0 | 464 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 3 - 193 (UniProt: Q9FUZ2)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | cloning artifact |
| Glu 2 | - | cloning artifact |
| Met 41 | Gly 121 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 88201.5 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 2784.8 | |
| All* | Total formula weight | 90986.3 |
