3M1H
Crystal Structure Analysis of the K3 Cleaved Adhesin Domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis w83
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Lysine specific cysteine protease | polymer | 178 | 18978.6 | 4 | UniProt (O52050) Pfam (PF07675) UniProt (by SIFTS) (Q51817) | Porphyromonas gingivalis (Bacteroides gingivalis) | |
| 2 | E, F, J, K, O... (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
| 3 | G, H, I, L, M... (A, B, C, D) | SODIUM ION | non-polymer | 23.0 | 9 | Chemie (NA) | |||
| 4 | V, W, X, Y (A, B, C, D) | water | water | 18.0 | 825 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1427 - 1602 (UniProt: O52050)
| PDB | External Database | Details |
|---|---|---|
| Gly 1425 | - | expression tag |
| Ser 1426 | - | expression tag |
| Asp 1448 | His 1448 | SEE REMARK 999 |
| Tyr 1479 | His 1479 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 75914.4 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 527.5 | |
| All* | Total formula weight | 76441.9 |
