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3M1H

Crystal Structure Analysis of the K3 Cleaved Adhesin Domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis w83

Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 2001
ChainResidue
AHOH211
AASP1446
AASP1448
AASP1450
AASN1452
AASN1490

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 2002
ChainResidue
ASER1470
AILE1472
AASP1595
AHOH10
AASP1433
AGLU1435

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 2003
ChainResidue
AHOH576
AHOH691
AHOH692
AHOH693
AHOH695
AASN1431

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA A 2004
ChainResidue
AHOH163
AHOH366
AHOH460
AHOH604
AHOH682
AASN1530
DHOH327

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 2005
ChainResidue
AHOH259
AHOH713
AHOH822
AHOH823
AALA1440
ATRP1442

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 2001
ChainResidue
BHOH18
BASP1446
BASP1448
BASP1450
BASN1452
BASN1490

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 2002
ChainResidue
BHOH477
BASP1433
BGLU1435
BSER1470
BILE1472
BASP1595

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA B 2003
ChainResidue
BHOH518
BHOH686
BHOH687
BHOH688
BHOH689
BHOH690
BASN1431

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA B 2004
ChainResidue
BHOH294
BHOH321
BHOH455
BHOH683
BHOH685
BASN1530
CHOH684

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 2005
ChainResidue
BHOH485
BHOH497
BHOH824
BHOH825
BALA1440
BTRP1442

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 2001
ChainResidue
CHOH100
CASP1446
CASP1448
CASP1450
CASN1452
CASN1490

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 2002
ChainResidue
CHOH36
CASP1433
CGLU1435
CSER1470
CILE1472
CASP1595

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA C 2003
ChainResidue
CHOH513
CHOH514
CHOH515
CHOH516
CHOH517
CASN1431
DSER1498

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA C 2004
ChainResidue
BHOH611
CHOH154
CHOH387
CHOH498
CHOH781
CGLU1483

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA D 2001
ChainResidue
DHOH28
DASP1446
DASP1448
DASP1450
DASN1452
DASN1490

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA D 2002
ChainResidue
DASP1595
DHOH285
DASP1433
DGLU1435
DSER1470
DILE1472

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA D 2003
ChainResidue
AHOH505
AHOH820
DHOH271
DHOH705
DHOH709
DGLU1483

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues40
DetailsBINDING: BINDING => ECO:0000269|PubMed:21812842, ECO:0007744|PDB:3M1H
ChainResidueDetails
AASP1433
AASP1595
BASP1433
BGLU1435
BASP1446
BASP1448
BASP1450
BASN1452
BSER1470
BILE1472
BASN1490
AGLU1435
BASP1595
CASP1433
CGLU1435
CASP1446
CASP1448
CASP1450
CASN1452
CSER1470
CILE1472
CASN1490
AASP1446
CASP1595
DASP1433
DGLU1435
DASP1446
DASP1448
DASP1450
DASN1452
DSER1470
DILE1472
DASN1490
AASP1448
DASP1595
AASP1450
AASN1452
ASER1470
AILE1472
AASN1490

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PDB entries from 2025-06-18

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