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3LV2

Crystal structure of Mycobacterium tuberculosis 7,8-diaminopelargonic acid synthase in complex with substrate analog sinefungin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasepolymer46249226.22UniProt (P0A4X6)
Pfam (PF00202)
UniProt (by SIFTS) (P9WQ81)
Mycobacterium tuberculosis7,8-diamino-pelargonic acid aminotransferase, DAPA aminotransferase, DAPA AT, Diaminopelargonic acid synthase
2C, E
(A, B)
PYRIDOXAL-5'-PHOSPHATEnon-polymer247.12Chemie (PLP)
3D
(A)
SINEFUNGINnon-polymer381.41Chemie (SFG)
4F, G
(A, B)
waterwater18.0305Chemie (HOH)
Sequence modifications
A, B: 1 - 437 (UniProt: P0A4X6)
PDBExternal DatabaseDetails
Met -24-expression tag
Gly -23-expression tag
Ser -22-expression tag
Ser -21-expression tag
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
Ser -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Leu -11-expression tag
Gln -10-expression tag
Gly -9-expression tag
Thr -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Ser -1-expression tag
His 0-expression tag
Arg 315His 315SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight98452.4
Non-Polymers*Number of molecules3
Total formula weight875.7
All*Total formula weight99328.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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