3L43
Crystal structure of the dynamin 3 GTPase domain bound with GDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Dynamin-3 | polymer | 319 | 35843.3 | 4 | UniProt (Q9UQ16) Pfam (PF00350) Pfam (PF01031) | Homo sapiens (human) | Dynamin, T-dynamin |
| 2 | E, I, K, M (A, B, C, D) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 4 | Chemie (GDP) PubChem (136073927) PubChem (135398619) PubChem (135402030) PubChem (135431654) PubChem (135566337) PubChem (135760556) PubChem (136026707) PubChem (136053418) PubChem (136663964) PubChem (136664748) PubChem (136759848) PubChem (136759849) PubChem (136759850) PubChem (136836636) PubChem (136847074) PubChem (172898537) | |||
| 3 | F, G, H, J, L... (A, B, C, D) | UNKNOWN ATOM OR ION | non-polymer | 6 | Chemie (UNX) | ||||
| 4 | O, P, Q, R (A, B, C, D) | water | water | 18.0 | 78 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 6 - 306 (UniProt: Q9UQ16)
| PDB | External Database | Details |
|---|---|---|
| Met -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Ser -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Glu -1 | - | expression tag |
| Asn 0 | - | expression tag |
| Leu 1 | - | expression tag |
| Tyr 2 | - | expression tag |
| Phe 3 | - | expression tag |
| Gln 4 | - | expression tag |
| Gly 5 | - | expression tag |
| Ile 74 | Val 74 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 143373.1 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1772.8 | |
| All* | Total formula weight | 145145.9 |
