3KOY
Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Aerobic)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, B, C, D) | D-ornithine aminomutase E component | polymer | 763 | 85412.2 | 4 | UniProt (Q8VPJ5) Pfam (PF09043) Pfam (PF16554) Pfam (PF02310) UniProt (by SIFTS) (E3PY95) | Clostridium sticklandii | |
| 2 | B, D, F, H (E, F, G, H) | D-ornithine aminomutase S component | polymer | 121 | 13645.8 | 4 | UniProt (Q8VPJ6) Pfam (PF16552) UniProt (by SIFTS) (E3PY96) | Clostridium sticklandii | |
| 3 | I, N, Q, R (A, B, C, D) | COBALAMIN | non-polymer | 1330.4 | 4 | Chemie (B12) | |||
| 4 | J, M, P, T (A, B, C, D) | (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine | non-polymer | 361.3 | 4 | Chemie (Z97) PubChem (137350203) | |||
| 5 | K, L, O, S (A, B, C, D) | 5'-DEOXYADENOSINE | non-polymer | 251.2 | 4 | Chemie (5AD) PubChem (16725083) PubChem (23638944) PubChem (25201172) PubChem (25796474) PubChem (25796475) PubChem (40467848) PubChem (23615209) PubChem (40467849) PubChem (57115448) PubChem (676784) PubChem (59731278) PubChem (6541038) PubChem (142) PubChem (71678) PubChem (90321697) PubChem (439182) PubChem (449044) PubChem (1277776) PubChem (121275112) PubChem (124363198) PubChem (6398669) PubChem (6928544) PubChem (133636852) PubChem (140689696) PubChem (142801875) PubChem (142801934) PubChem (12827542) |
Sequence modifications
A, B, C, D: 1 - 743 (UniProt: Q8VPJ5)
| PDB | External Database | Details |
|---|---|---|
| - | Ile 218 | SEE REMARK 999 |
| - | Asp 219 | SEE REMARK 999 |
| - | Gly 220 | SEE REMARK 999 |
| Ser 744 | - | expression tag |
| Glu 745 | - | expression tag |
| Asp 746 | - | expression tag |
| Pro 747 | - | expression tag |
| Asn 748 | - | expression tag |
| Ser 749 | - | expression tag |
| Ser 750 | - | expression tag |
| Ser 751 | - | expression tag |
| Val 752 | - | expression tag |
| Asp 753 | - | expression tag |
| Lys 754 | - | expression tag |
| Leu 755 | - | expression tag |
| Ala 756 | - | expression tag |
| Ala 757 | - | expression tag |
| Ala 758 | - | expression tag |
| Leu 759 | - | expression tag |
| Glu 760 | - | expression tag |
| His 761 | - | expression tag |
| His 762 | - | expression tag |
| His 763 | - | expression tag |
| His 764 | - | expression tag |
| His 765 | - | expression tag |
| His 766 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 396232.1 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 7771.5 | |
| All* | Total formula weight | 404003.6 |
