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3KK1

HIV-1 reverse transcriptase-DNA complex with nuceotide inhibitor GS-9148-diphosphate bound in nucleotide site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Reverse transcriptase p66 subunitpolymer56064521.91UniProt (P04585)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Pfam (PF00075)
Human immunodeficiency virus type 1 (HIV-1)p66 RT
2B
(B)
Reverse transcriptase p51 subunitpolymer45252748.41UniProt (P04585)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Human immunodeficiency virus type 1 (HIV-1)p51 RT
3C
(P)
5'-D(*AP*CP*A*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*(DOC))-3'polymer216360.11
4D
(T)
5'-D(*A*TP*GP*GP*TP*GP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'polymer278423.41
5E, F, J
(A, P)
SULFATE IONnon-polymer96.13Chemie (SO4)
6G, H
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
7I
(A)
[(2R,5R)-5-(6-aminopurin-9-yl)-4-fluoro-2,5-dihydrofuran-2-yl]oxymethyl-[hydroxy(phosphonooxy)phosphoryl]oxy-phosphinic acidnon-polymer491.21Chemie (914)
8K, L, M, N
(A, B, P, T)
waterwater18.0154Chemie (HOH)
Sequence modifications
A: 1 - 560 (UniProt: P04585)
PDBExternal DatabaseDetails
Cys 258Gln 845engineered mutation
Ser 280Cys 867engineered mutation
B: 1 - 440 (UniProt: P04585)
PDBExternal DatabaseDetails
Met -11-expression tag
Gly -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Ser -1-expression tag
Ser 0-expression tag
Ser 280Cys 867engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight132053.8
Non-Polymers*Number of molecules6
Total formula weight828.0
All*Total formula weight132881.8
*Water molecules are not included.

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PDB entries from 2024-11-13

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