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3KHR

Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesion

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, B)
DNA polymerase IVpolymer34138945.42UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
Sulfolobus solfataricus P2Pol IV
2B, E
(D, H)
5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*CP*(DDG))-3'polymer134046.62
3C, F
(E, J)
5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'polymer195678.72
4G, L
(A, B)
THYMIDINE-5'-TRIPHOSPHATEnon-polymer482.22Chemie (TTP)
5H, I, J, M, N...
(A, B)
CALCIUM IONnon-polymer40.16Chemie (CA)
6K, P
(E, J)
2-AMINOFLUORENEnon-polymer181.22Chemie (AF)
7Q, R, S, T, U...
(A, D, E, B, H...)
waterwater18.0402Chemie (HOH)
Sequence modifications
A, B: 2 - 341 (UniProt: Q97W02)
PDBExternal DatabaseDetails
Gly 1-expression tag
D, H: 803 - 815 (PDB: 3KHR)
PDBExternal DatabaseDetails
Ddg 815G 14engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight97341.5
Non-Polymers*Number of molecules10
Total formula weight1567.3
All*Total formula weight98908.7
*Water molecules are not included.

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PDB entries from 2024-10-30

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