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3KHL

Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BDNA polymerase IVpolymer34138945.42UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
In PDB
Sulfolobus solfataricus P2Pol IV
2D, H5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*AP*(DDG))-3'polymer134070.72
3E, J5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'polymer205967.92
4A, BTHYMIDINE-5'-TRIPHOSPHATEnon-polymer482.22Chemie (TTP)
5A, BCALCIUM IONnon-polymer40.16Chemie (CA)
6E, J2-AMINOFLUORENEnon-polymer181.22Chemie (AF)
7waterwater18.0316Chemie (HOH)
Sequence modifications
A, B: 2 - 341 (UniProt: Q97W02)
PDBExternal DatabaseDetails
Gly 1-expression tag
D, H: 803 - 815 (PDB: 3KHL)
PDBExternal DatabaseDetails
Ddg 815G 13engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight97967.9
Non-Polymers*Number of molecules10
Total formula weight1567.3
All*Total formula weight99535.1
*Water molecules are not included.

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PDB entries from 2024-09-18

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