3KHG
Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | DNA polymerase IV | polymer | 341 | 38945.4 | 2 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) In PDB | Sulfolobus solfataricus P2 | Pol IV |
2 | D, H | 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3' | polymer | 13 | 4070.7 | 2 | |||
3 | E, J | 5'-D(*C*CP*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3' | polymer | 19 | 5678.7 | 2 | |||
4 | A, B | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (DGT) | |||
5 | A, B | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
6 | A | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
7 | E, J | 2-AMINOFLUORENE | non-polymer | 181.2 | 2 | Chemie (AF) | |||
8 | water | water | 18.0 | 50 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 341 (UniProt: Q97W02)
D, H: 802 - 814 (PDB: 3KHG)
E, J: 901 - 919 (PDB: 3KHG)
PDB | External Database | Details |
---|---|---|
Gly 1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
2da 814 | A 13 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Dg 906 | C 6 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 97389.5 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1855.6 | |
All* | Total formula weight | 99245.1 |