Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KDE

Crystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
5'-D(*GP*TP*TP*AP*AP*GP*(BRU)P*GP*GP*A)-3'polymer103188.91
2B
(B)
5'-D(*(BRU)P*CP*CP*AP*CP*TP*TP*AP*AP*C)-3'polymer103028.81
3C
(C)
Transposable element P transposasepolymer778686.31UniProt (Q7M3K2)
Pfam (PF05485)
Drosophila melanogaster (Fruit fly)P-element transposase
4D
(C)
ZINC IONnon-polymer65.41Chemie (ZN)
5E, F, G
(A, B, C)
waterwater18.0107Chemie (HOH)
Sequence modifications
A: 1 - 10 (PDB: 3KDE)
PDBExternal DatabaseDetails
Bru 7Dt 7engineered mutation
B: 11 - 20 (PDB: 3KDE)
PDBExternal DatabaseDetails
Bru 11Dt 1engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight14904.0
Non-Polymers*Number of molecules1
Total formula weight65.4
All*Total formula weight14969.4
*Water molecules are not included.

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon