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3K57

Crystal structure of E.coli Pol II-normal DNA-dATP ternary complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase IIpolymer78690459.71UniProt (P21189)
Pfam (PF21474)
Pfam (PF22587)
Pfam (PF03104)
Pfam (PF00136)
Escherichia coliPol II
2B
(T)
DNA (5'-D(*G*TP*AP*TP*GP*TP*AP*CP*GP*CP*TP*AP*GP*GP*CP*AP*CP*G)-3')polymer185556.61
3C
(P)
DNA (5'-D(*GP*TP*GP*CP*CP*TP*AP*GP*CP*GP*TP*AP*(DOC))-3')polymer133951.61
4D
(A)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.21Chemie (DTP)
5E, F
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6G, H, I
(A, T, P)
waterwater18.0525Chemie (HOH)
Sequence modifications
A: 1 - 783 (UniProt: P21189)
PDBExternal DatabaseDetails
Gly -2-expression tag
Pro -1-expression tag
His 0-expression tag
Asn 335Asp 335engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight99967.9
Non-Polymers*Number of molecules3
Total formula weight539.8
All*Total formula weight100507.7
*Water molecules are not included.

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PDB entries from 2025-07-30

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