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3JD5

Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome

Replaces:  3J6V
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A28S ribosomal RNA, mitochondialpolymer955306932.71Bos taurus (bovine)
2B28S ribosomal protein S2, mitochondrialpolymer29331775.51UniProt (P82923)
Pfam (PF00318)
In PDB
Bos taurus (bovine)MRP-S2, S2mt
3C28S ribosomal protein S24, mitochondrialpolymer16719111.51UniProt (Q2M2T7)
Pfam (PF14955)
In PDB
Bos taurus (bovine)MRP-S24, S24mt
4E28S ribosomal protein S5, mitochondrialpolymer43047956.91UniProt (Q2KID9)
Pfam (PF21251)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Bos taurus (bovine)MRP-S5, S5mt
5F28S ribosomal protein S6, mitochondrialpolymer12414171.61UniProt (P82931)
Pfam (PF01250)
In PDB
Bos taurus (bovine)MRP-S6, S6mt
6G28S ribosomal protein S7, mitochondrialpolymer24228179.01UniProt (Q3T040)
Pfam (PF00177)
In PDB
Bos taurus (bovine)MRP-S7, S7mt
7I28S ribosomal protein S9, mitochondrialpolymer39645302.81UniProt (Q58DQ5)
Pfam (PF00380)
In PDB
Bos taurus (bovine)MRP-S9, S9mt
8J28S ribosomal protein S10, mitochondrialpolymer20123069.61UniProt (P82670)
Pfam (PF00338)
In PDB
Bos taurus (bovine)MRP-S10, S10mt
9K28S ribosomal protein S11, mitochondrialpolymer19720869.01UniProt (P82911)
Pfam (PF00411)
In PDB
Bos taurus (bovine)MRP-S11, S11mt
10L28S ribosomal protein S12, mitochondrialpolymer13915479.31UniProt (Q29RU1)
Pfam (PF00164)
In PDB
Bos taurus (bovine)MRP-S12, S12mt
11N28S ribosomal protein S14, mitochondrialpolymer12815073.71UniProt (Q6B860)
Pfam (PF00253)
In PDB
Bos taurus (bovine)MRP-S14, S14mt
12O28S ribosomal protein S15, mitochondrialpolymer25629245.31UniProt (E1BBB4)
Pfam (PF00312)
UniProt (by SIFTS) (P82913)
In PDB
Bos taurus (bovine)
13P28S ribosomal protein S16, mitochondrialpolymer13515157.61UniProt (P82915)
Pfam (PF00886)
In PDB
Bos taurus (bovine)MRP-S16, S16mt
14Q28S ribosomal protein S17, mitochondrialpolymer13014497.11UniProt (P82916)
Pfam (PF00366)
In PDB
Bos taurus (bovine)MRP-S17, S17mt
15R28S ribosomal protein S18c, mitochondrialpolymer14316240.31UniProt (P82917)
Pfam (PF01084)
In PDB
Bos taurus (bovine)MRP-S18-c, Mrps18-c, S18mt-c, 28S ribosomal protein S18-1, mitochondrial, MRP-S18-1
16U28S ribosomal protein S21, mitochondrialpolymer8710697.61UniProt (P82920)
Pfam (PF01165)
In PDB
Bos taurus (bovine)MRP-S21, S21mt
17a28S ribosomal protein S22, mitochondrialpolymer35940720.61UniProt (P82649)
Pfam (PF10245)
In PDB
Bos taurus (bovine)MRP-S22, S22mt
18b28S ribosomal protein S23, mitochondrialpolymer19021625.51UniProt (Q2NL27)
Pfam (PF10484)
In PDB
Bos taurus (bovine)MRP-S23, S23mt
19c28S ribosomal protein S25, mitochondrialpolymer17320085.31UniProt (P82669)
Pfam (PF05047)
In PDB
Bos taurus (bovine)MRP-S25, S25mt
20d28S ribosomal protein S26, mitochondrialpolymer20523815.91UniProt (Q3SZ86)
Pfam (PF14943)
In PDB
Bos taurus (bovine)MRP-S26, S26mt
21e28S ribosomal protein S27, mitochondrialpolymer41548017.91UniProt (Q32PI8)
Pfam (PF10037)
In PDB
Bos taurus (bovine)MRP-S27, S27mt
22f28S ribosomal protein S28, mitochondrialpolymer18921078.01UniProt (P82928)
Pfam (PF10246)
In PDB
Bos taurus (bovine)MRP-S28, S28mt
23g28S ribosomal protein S29, mitochondrialpolymer39745634.71UniProt (P82922)
Pfam (PF10236)
In PDB
Bos taurus (bovine)MRP-S29, S29mt, Death-associated protein 3, DAP-3
24h28S ribosomal protein S31, mitochondrialpolymer38643740.51UniProt (P82925)
Pfam (PF15433)
In PDB
Bos taurus (bovine)MRP-S31, S31mt
25i28S ribosomal protein S33, mitochondrialpolymer10612480.61UniProt (P82926)
Pfam (PF08293)
In PDB
Bos taurus (bovine)MRP-S33, S33mt
26j28S ribosomal protein S34, mitochondrialpolymer21825880.81UniProt (P82929)
Pfam (PF16053)
In PDB
Bos taurus (bovine)MRP-S34, S34mt
27k28S ribosomal protein S35, mitochondrialpolymer32537129.71UniProt (Q2YDF6)
Pfam (PF10213)
In PDB
Bos taurus (bovine)MRP-S35, S35mt, 28S ribosomal protein S28, mitochondrial, MRP-S28, S28mt
28mCoiled-coil-helix-coiled-coil-helix domain containing 1polymer11813582.01UniProt (Q2HJE8)
Pfam (PF06747)
In PDB
Bos taurus (bovine)
29nAurora kinase A interacting protein 1polymer19922968.41UniProt (Q0VCJ1)
Pfam (PF08213)
In PDB
Bos taurus (bovine)
30oPentatricopeptide repeat domain-containing protein 3, mitochondrialpolymer57560587.81UniProt (Q2KI62)
Pfam (PF22330)
Pfam (PF13812)
In PDB
Bos taurus (bovine)28S ribosomal protein S39, mitochondrial, MRP-S39
31p28S ribosomal protein S18b, mitochondrialpolymer25829217.41UniProt (P82918)
Pfam (PF01084)
In PDB
Bos taurus (bovine)MRP-S18-b, Mrps18-b, S18mt-b, 28S ribosomal protein S18-2, mitochondrial, MRP-S18-2
32s, zunknownpolymer171464.82Bos taurus (bovine)
Sequence modifications
o: 1 - 143 (UniProt: Q2KI62)
o: 371 - 383 (UniProt: Q2KI62)
o: 417 - 676 (UniProt: Q2KI62)
o: 1 - 688 (PDB: 3JD5)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains33
Total formula weight1123253.9
All*Total formula weight1123253.9
*Water molecules are not included.

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PDB entries from 2024-07-17

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