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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

3JAH

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AuL2polymer24426570.11UniProt (G1TT27)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Oryctolagus cuniculus (rabbit)
2BuL3polymer39445119.81UniProt (G1TL06)
Pfam (PF00297)
In PDB		Oryctolagus cuniculus (rabbit)
3CuL4polymer36241115.51UniProt (G1SVW5)
Pfam (PF00573)
Pfam (PF14374)
In PDB		Oryctolagus cuniculus (rabbit)
4DuL18polymer29234006.31UniProt (G1SYJ6)
Pfam (PF14204)
Pfam (PF17144)
In PDB		Oryctolagus cuniculus (rabbit)
5EeL6polymer24828529.81UniProt (G1TG04)
Pfam (PF03868)
Pfam (PF01159)
In PDB		Oryctolagus cuniculus (rabbit)
6FuL30polymer22526662.81Oryctolagus cuniculus (rabbit)
7GeL8polymer24127480.61UniProt (G1STW0)
Pfam (PF01248)
In PDB		Oryctolagus cuniculus (rabbit)
8HuL6polymer19021627.21UniProt (G1TX33)
Pfam (PF00347)
UniProt (by SIFTS) (G1SWI6)
In PDB		Oryctolagus cuniculus (rabbit)
9IuL16polymer21324511.91UniProt (B7NZQ2)
Pfam (PF00252)
In PDB		Oryctolagus cuniculus (rabbit)
10JuL5polymer16919270.31UniProt (G1TUB8)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Oryctolagus cuniculus (rabbit)
11LeL13polymer21024216.51Oryctolagus cuniculus (rabbit)
12MeL14polymer13816217.41UniProt (U3KNW6)
Pfam (PF01929)
In PDB		Oryctolagus cuniculus (rabbit)
13NeL15polymer20324076.11UniProt (G1T0C1)
Pfam (PF00827)
In PDB		Oryctolagus cuniculus (rabbit)
14OuL13polymer19923248.91Oryctolagus cuniculus (rabbit)
15PuL22polymer15317757.61Oryctolagus cuniculus (rabbit)
16QuL14polymer18721457.41Oryctolagus cuniculus (rabbit)
17ReL19polymer18021613.01Oryctolagus cuniculus (rabbit)
18SeL20polymer17520696.41Oryctolagus cuniculus (rabbit)
19TeL21polymer15918478.81UniProt (G1SHQ2)
Pfam (PF01157)
In PDB		Oryctolagus cuniculus (rabbit)
20UeL22polymer9911481.21Oryctolagus cuniculus (rabbit)
21VuL14polymer13113972.41UniProt (G1T6D1)
Pfam (PF00238)
In PDB		Oryctolagus cuniculus (rabbit)
22WeL24polymer637512.81UniProt (G1TLD5)
In PDB		Oryctolagus cuniculus (rabbit)
23XuL23polymer11913856.41UniProt (G1SE76)
Pfam (PF03939)
Pfam (PF00276)
In PDB		Oryctolagus cuniculus (rabbit)
24YuL24polymer13415891.81UniProt (G1SQH0)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Oryctolagus cuniculus (rabbit)
25ZeL27polymer13515704.61UniProt (G1TXF6)
Pfam (PF00467)
Pfam (PF01777)
In PDB		Oryctolagus cuniculus (rabbit)
26auL15polymer14716489.41UniProt (G1SNY0)
Pfam (PF00828)
In PDB		Oryctolagus cuniculus (rabbit)
27beL29polymer758706.31UniProt (G1SGR6)
Pfam (PF01779)
In PDB		Oryctolagus cuniculus (rabbit)
28ceL30polymer9410496.41Oryctolagus cuniculus (rabbit)
29deL31polymer10712635.71UniProt (G1SHG0)
Pfam (PF01198)
In PDB		Oryctolagus cuniculus (rabbit)
30eeL32polymer12815022.01UniProt (G1TUN8)
Pfam (PF01655)
In PDB		Oryctolagus cuniculus (rabbit)
31feL33polymer10912449.61UniProt (G1SF08)
Pfam (PF01247)
In PDB		Oryctolagus cuniculus (rabbit)
32geL34polymer11412994.61UniProt (G1U945)
Pfam (PF01199)
In PDB		Oryctolagus cuniculus (rabbit)
33huL29polymer12214435.41UniProt (G1SIT5)
Pfam (PF00831)
In PDB		Oryctolagus cuniculus (rabbit)
34ieL36polymer10211888.41UniProt (G1TTQ5)
Pfam (PF01158)
In PDB		Oryctolagus cuniculus (rabbit)
35jeL37polymer8610090.91UniProt (U3KPD5)
Pfam (PF01907)
In PDB		Oryctolagus cuniculus (rabbit)
36keL38polymer698107.81Oryctolagus cuniculus (rabbit)
37leL39polymer506295.61UniProt (G1SYU7)
Pfam (PF00832)
In PDB		Oryctolagus cuniculus (rabbit)
38meL40polymer526199.61Oryctolagus cuniculus (rabbit)
39neL41polymer233213.11UniProt (A0A087WNH4)
Pfam (PF05162)
In PDB		Oryctolagus cuniculus (rabbit)
40oeL42polymer10412198.61UniProt (G1T040)
Pfam (PF00935)
In PDB		Oryctolagus cuniculus (rabbit)
41peL43polymer9110168.21UniProt (G1SY53)
Pfam (PF01780)
In PDB		Oryctolagus cuniculus (rabbit)
42reL28polymer12514319.81UniProt (G1U7L1)
Pfam (PF01778)
In PDB		Oryctolagus cuniculus (rabbit)
43suL10polymer19821747.31UniProt (G1U6N2)
In PDB		Oryctolagus cuniculus (rabbit)
44tuL11polymer16317689.51UniProt (G1SMR7)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Oryctolagus cuniculus (rabbit)
451peptidepolymer151788.01Oryctolagus cuniculus (rabbit)
462tRNA(Val)polymer7624436.61Oryctolagus cuniculus (rabbit)
473tRNA(Lys)polymer7524102.31Oryctolagus cuniculus (rabbit)
48528S ribosomal RNApolymer36621186579.51Oryctolagus cuniculus (rabbit)
4975S ribosomal RNApolymer12038691.91Oryctolagus cuniculus (rabbit)
5085.8S ribosomal RNApolymer15650143.61Oryctolagus cuniculus (rabbit)
51918S ribosomal RNApolymer1719554751.31Oryctolagus cuniculus (rabbit)
52AAuS2polymer20823360.81Oryctolagus cuniculus (rabbit)
53BBeS1polymer21324759.11UniProt (G1SS70)
Pfam (PF01015)
In PDB		Oryctolagus cuniculus (rabbit)
54CCuS5polymer21824050.41UniProt (G1TUT9)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Oryctolagus cuniculus (rabbit)
55DDuS3polymer22725158.51UniProt (G1TNM3)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Oryctolagus cuniculus (rabbit)
56EEeS4polymer26229497.71UniProt (G1TK17)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB		Oryctolagus cuniculus (rabbit)
57FFuS7polymer19121525.91UniProt (G1TFM5)
Pfam (PF00177)
In PDB		Oryctolagus cuniculus (rabbit)
58GGeS6polymer23727471.51UniProt (G1TM55)
Pfam (PF01092)
In PDB		Oryctolagus cuniculus (rabbit)
59HHeS7polymer18921603.21UniProt (G1SVB0)
Pfam (PF01251)
In PDB		Oryctolagus cuniculus (rabbit)
60IIeS8polymer20624003.01UniProt (G1TJW1)
Pfam (PF01201)
In PDB		Oryctolagus cuniculus (rabbit)
61JJuS4polymer18521649.61UniProt (B7NZS8)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Oryctolagus cuniculus (rabbit)
62KKeS10polymer9811774.01UniProt (G1TPV3)
Pfam (PF03501)
In PDB		Oryctolagus cuniculus (rabbit)
63LLuS17polymer15217657.81UniProt (G1TRM4)
Pfam (PF16205)
Pfam (PF00366)
In PDB		Oryctolagus cuniculus (rabbit)
64MMeS12polymer12413766.11UniProt (G1SFR8)
Pfam (PF01248)
In PDB		Oryctolagus cuniculus (rabbit)
65NNuS15polymer15017128.21UniProt (G1SP51)
Pfam (PF08069)
Pfam (PF00312)
In PDB		Oryctolagus cuniculus (rabbit)
66OOuS11polymer13614544.71UniProt (G1T1F0)
Pfam (PF00411)
In PDB		Oryctolagus cuniculus (rabbit)
67PPuS19polymer12715151.91UniProt (G1U0Q2)
Pfam (PF00203)
In PDB		Oryctolagus cuniculus (rabbit)
68QQuS9polymer14115975.81UniProt (G1SGX4)
Pfam (PF00380)
In PDB		Oryctolagus cuniculus (rabbit)
69RReS17polymer12914969.41UniProt (G1TU13)
Pfam (PF00833)
In PDB		Oryctolagus cuniculus (rabbit)
70SSuS13polymer13716170.81UniProt (G1SZI5)
Pfam (PF00416)
In PDB		Oryctolagus cuniculus (rabbit)
71TTeS19polymer14115683.11UniProt (G1TN62)
Pfam (PF01090)
In PDB		Oryctolagus cuniculus (rabbit)
72UUuS10polymer10411765.91UniProt (G1SIZ2)
Pfam (PF00338)
In PDB		Oryctolagus cuniculus (rabbit)
73VVeS21polymer839115.41UniProt (G1TM82)
Pfam (PF01249)
In PDB		Oryctolagus cuniculus (rabbit)
74WWuS8polymer12914734.41UniProt (G1TG89)
Pfam (PF00410)
In PDB		Oryctolagus cuniculus (rabbit)
75XXuS12polymer14115626.41UniProt (G1SZ47)
Pfam (PF00164)
In PDB		Oryctolagus cuniculus (rabbit)
76YYeS24polymer12614604.31UniProt (G1T3D8)
Pfam (PF01282)
In PDB		Oryctolagus cuniculus (rabbit)
77ZZeS25polymer758526.11UniProt (G1TDB3)
Pfam (PF03297)
In PDB		Oryctolagus cuniculus (rabbit)
78aaeS26polymer9811184.21Oryctolagus cuniculus (rabbit)
79bbeS27polymer839349.01UniProt (G1TZ76)
Pfam (PF01667)
In PDB		Oryctolagus cuniculus (rabbit)
80cceS28polymer616819.81UniProt (G1TIB4)
Pfam (PF01200)
In PDB		Oryctolagus cuniculus (rabbit)
81dduS14polymer536364.41UniProt (G1U7M4)
Pfam (PF00253)
In PDB		Oryctolagus cuniculus (rabbit)
82eeeS30polymer576512.71UniProt (G1T8A2)
Pfam (PF04758)
In PDB		Oryctolagus cuniculus (rabbit)
83ffeS31polymer688001.41UniProt (G1SK22)
Pfam (PF01599)
In PDB		Oryctolagus cuniculus (rabbit)
84ggRACK1polymer31334669.11UniProt (G1SJB4)
Pfam (PF00400)
In PDB		Oryctolagus cuniculus (rabbit)
85hhmRNApolymer123837.31Oryctolagus cuniculus (rabbit)
86iieRF1polymer41646650.31UniProt (P62495)
Pfam (PF03463)
Pfam (PF03464)
Pfam (PF03465)
In PDB		Homo sapiens (human)
87jjABCE1polymer59466857.71UniProt (G1SG72)
Pfam (PF04068)
Pfam (PF00037)
Pfam (PF00005)
In PDB		Oryctolagus cuniculus (rabbit)
885, 9, hh, B, C...MAGNESIUM IONnon-polymer24.3195Chemie (MG)
89aa, dd, ff, g, j...ZINC IONnon-polymer65.48Chemie (ZN)
90jjIRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
91jjADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
Sequence modifications
C: 2 - 360 (UniProt: G1SVW5)
PDBExternal DatabaseDetails
Lys 361-EXPRESSION TAG
Lys 362-EXPRESSION TAG
Ser 363-EXPRESSION TAG
G: 26 - 266 (UniProt: G1STW0)
PDBExternal DatabaseDetails
Gly 191Cys 167CONFLICT
CC: 59 - 276 (UniProt: G1TUT9)
PDBExternal DatabaseDetails
Arg 194His 174CONFLICT
Gly 228Ser 208CONFLICT
EE: 2 - 263 (UniProt: G1TK17)
PDBExternal DatabaseDetails
Gly 25Ser 25CONFLICT
II: 2 - 207 (UniProt: G1TJW1)
PDBExternal DatabaseDetails
Arg 47Gly 47CONFLICT
TT: 4 - 144 (UniProt: G1TN62)
PDBExternal DatabaseDetails
Gly 119Trp 119CONFLICT
VV: 1 - 83 (UniProt: G1TM82)
PDBExternal DatabaseDetails
Asn 3Ser 3CONFLICT
Asp 4Asn 4CONFLICT
Phe 50Ser 50CONFLICT
Ala 75Ser 75CONFLICT
cc: 8 - 68 (UniProt: G1TIB4)
PDBExternal DatabaseDetails
Ile 18Leu 18CONFLICT
Lys 20Arg 20CONFLICT
His 40Arg 40CONFLICT
Thr 42Ile 42CONFLICT
ff: 78 - 146 (UniProt: G1SK22)
PDBExternal DatabaseDetails
-Val 130DELETION
ii: 6 - 421 (UniProt: P62495)
PDBExternal DatabaseDetails
Ala 183Gly 183ENGINEERED MUTATION
Ala 184Gly 184ENGINEERED MUTATION
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains87
Total formula weight3337236.9
Non-Polymers*Number of molecules207
Total formula weight6820.4
All*Total formula weight3344057.4
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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