3J9W
Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (AA) | 16S ribosomal RNA | polymer | 1555 | 503698.3 | 1 | Bacillus subtilis subsp. subtilis str. 168 | ||
| 2 | B (AB) | 30S ribosomal protein uS2 | polymer | 246 | 28009.3 | 1 | UniProt (P21464) Pfam (PF00318) | Bacillus subtilis subsp. subtilis str. 168 | |
| 3 | C (AC) | 30S ribosomal protein uS3 | polymer | 218 | 24364.9 | 1 | UniProt (P21465) Pfam (PF07650) Pfam (PF00189) | Bacillus subtilis subsp. subtilis str. 168 | |
| 4 | D (AD) | 30S ribosomal protein uS4 | polymer | 200 | 22874.3 | 1 | UniProt (P21466) Pfam (PF00163) Pfam (PF01479) | Bacillus subtilis subsp. subtilis str. 168 | |
| 5 | E (AE) | 30S ribosomal protein uS5 | polymer | 166 | 17650.6 | 1 | UniProt (P21467) Pfam (PF00333) Pfam (PF03719) | Bacillus subtilis subsp. subtilis str. 168 | |
| 6 | F (AF) | 30S ribosomal protein bS6 | polymer | 95 | 11140.5 | 1 | UniProt (P21468) Pfam (PF01250) | Bacillus subtilis subsp. subtilis str. 168 | |
| 7 | G (AG) | 30S ribosomal protein uS7 | polymer | 156 | 17915.9 | 1 | UniProt (P21469) Pfam (PF00177) | Bacillus subtilis subsp. subtilis str. 168 | |
| 8 | H (AH) | 30S ribosomal protein uS8 | polymer | 132 | 14901.4 | 1 | UniProt (P12879) Pfam (PF00410) | Bacillus subtilis subsp. subtilis str. 168 | |
| 9 | I (AI) | 30S ribosomal protein uS9 | polymer | 130 | 14335.5 | 1 | UniProt (P21470) Pfam (PF00380) | Bacillus subtilis subsp. subtilis str. 168 | |
| 10 | J (AJ) | 30S ribosomal protein uS10 | polymer | 102 | 11687.7 | 1 | UniProt (P21471) Pfam (PF00338) | Bacillus subtilis subsp. subtilis str. 168 | |
| 11 | K (AK) | 30S ribosomal protein uS11 | polymer | 131 | 13952.0 | 1 | UniProt (P04969) Pfam (PF00411) | Bacillus subtilis subsp. subtilis str. 168 | |
| 12 | L (AL) | 30S ribosomal protein uS12 | polymer | 138 | 15248.7 | 1 | UniProt (P21472) Pfam (PF00164) | Bacillus subtilis subsp. subtilis str. 168 | |
| 13 | M (AM) | 30S ribosomal protein uS13 | polymer | 121 | 13818.1 | 1 | UniProt (P20282) Pfam (PF00416) | Bacillus subtilis subsp. subtilis str. 168 | |
| 14 | N (AN) | 30S ribosomal protein uS14 | polymer | 61 | 7263.8 | 1 | UniProt (P12878) Pfam (PF00253) | Bacillus subtilis subsp. subtilis str. 168 | |
| 15 | O (AO) | 30S ribosomal protein uS15 | polymer | 89 | 10597.2 | 1 | UniProt (P21473) Pfam (PF00312) | Bacillus subtilis subsp. subtilis str. 168 | |
| 16 | P (AP) | 30S ribosomal protein bS16 | polymer | 90 | 10153.8 | 1 | UniProt (P21474) Pfam (PF00886) | Bacillus subtilis subsp. subtilis str. 168 | |
| 17 | Q (AQ) | 30S ribosomal protein uS17 | polymer | 87 | 10221.0 | 1 | UniProt (P12874) Pfam (PF00366) | Bacillus subtilis subsp. subtilis str. 168 | |
| 18 | R (AR) | 30S ribosomal protein bS18 | polymer | 79 | 8990.6 | 1 | UniProt (P21475) Pfam (PF01084) | Bacillus subtilis subsp. subtilis str. 168 | |
| 19 | S (AS) | 30S ribosomal protein uS19 | polymer | 92 | 10607.3 | 1 | UniProt (P21476) Pfam (PF00203) | Bacillus subtilis subsp. subtilis str. 168 | |
| 20 | T (AT) | 30S ribosomal protein bS20 | polymer | 88 | 9622.2 | 1 | UniProt (P21477) Pfam (PF01649) | Bacillus subtilis subsp. subtilis str. 168 | |
| 21 | U (AX) | tRNA-Asp | polymer | 77 | 24815.7 | 1 | Bacillus subtilis subsp. subtilis str. 168 | ||
| 22 | V (AY) | mRNA | polymer | 19 | 6204.8 | 1 | Bacillus subtilis subsp. subtilis str. 168 | ||
| 23 | W (AZ) | MifM | polymer | 95 | 11157.0 | 1 | UniProt (Q7WY64) | Bacillus subtilis subsp. subtilis str. 168 | |
| 24 | X (B0) | 50S ribosomal protein bL28 | polymer | 62 | 6826.1 | 1 | UniProt (P37807) Pfam (PF00830) | Bacillus subtilis subsp. subtilis str. 168 | |
| 25 | Y (B1) | 50S ribosomal protein uL29 | polymer | 66 | 7728.0 | 1 | UniProt (P12873) Pfam (PF00831) | Bacillus subtilis subsp. subtilis str. 168 | |
| 26 | Z (B2) | 50S ribosomal protein uL30 | polymer | 59 | 6650.8 | 1 | UniProt (P19947) Pfam (PF00327) | Bacillus subtilis subsp. subtilis str. 168 | |
| 27 | AA (B3) | 50S ribosomal protein bL31 | polymer | 66 | 7458.6 | 1 | UniProt (Q03223) Pfam (PF01197) | Bacillus subtilis subsp. subtilis str. 168 | |
| 28 | BA (B4) | 50S ribosomal protein bL32 | polymer | 59 | 6745.1 | 1 | UniProt (O34687) Pfam (PF01783) | Bacillus subtilis subsp. subtilis str. 168 | |
| 29 | CA (B5) | 50S ribosomal protein bL33 | polymer | 49 | 5915.9 | 1 | UniProt (P56849) Pfam (PF00471) | Bacillus subtilis subsp. subtilis str. 168 | |
| 30 | DA (B6) | 50S ribosomal protein bL34 | polymer | 44 | 5271.3 | 1 | UniProt (P05647) Pfam (PF00468) | Bacillus subtilis subsp. subtilis str. 168 | |
| 31 | EA (B7) | 50S ribosomal protein bL35 | polymer | 66 | 7581.1 | 1 | UniProt (P55874) Pfam (PF01632) | Bacillus subtilis subsp. subtilis str. 168 | |
| 32 | FA (B8) | 50S ribosomal protein bL36 | polymer | 37 | 4318.4 | 1 | UniProt (P20278) Pfam (PF00444) | Bacillus subtilis subsp. subtilis str. 168 | |
| 33 | GA (BA) | 23S ribosomal RNA | polymer | 2928 | 949606.3 | 1 | Bacillus subtilis subsp. subtilis str. 168 | ||
| 34 | HA (BB) | 5S ribosomal RNA | polymer | 119 | 38423.9 | 1 | Bacillus subtilis subsp. subtilis str. 168 | ||
| 35 | IA (BD) | 50S ribosomal protein uL2 | polymer | 277 | 30335.1 | 1 | UniProt (P42919) Pfam (PF00181) Pfam (PF03947) | Bacillus subtilis subsp. subtilis str. 168 | |
| 36 | JA (BE) | 50S ribosomal protein uL3 | polymer | 209 | 22723.3 | 1 | UniProt (P42920) Pfam (PF00297) | Bacillus subtilis subsp. subtilis str. 168 | |
| 37 | KA (BF) | 50S ribosomal protein uL4 | polymer | 207 | 22425.0 | 1 | UniProt (P42921) Pfam (PF00573) | Bacillus subtilis subsp. subtilis str. 168 | |
| 38 | LA (BG) | 50S ribosomal protein uL5 | polymer | 179 | 20177.6 | 1 | UniProt (P12877) Pfam (PF00281) Pfam (PF00673) | Bacillus subtilis subsp. subtilis str. 168 | |
| 39 | MA (BH) | 50S ribosomal protein uL6 | polymer | 179 | 19543.4 | 1 | UniProt (P46898) Pfam (PF00347) | Bacillus subtilis subsp. subtilis str. 168 | |
| 40 | NA (BJ) | 50S ribosomal protein uL10 | polymer | 166 | 18101.7 | 1 | UniProt (P42923) Pfam (PF00466) | Bacillus subtilis subsp. subtilis str. 168 | |
| 41 | OA (BK) | 50S ribosomal protein uL11 | polymer | 141 | 14951.4 | 1 | UniProt (Q06796) Pfam (PF03946) Pfam (PF00298) | Bacillus subtilis subsp. subtilis str. 168 | |
| 42 | PA (BM) | 50S ribosomal protein uL13 | polymer | 145 | 16407.1 | 1 | UniProt (P70974) Pfam (PF00572) | Bacillus subtilis subsp. subtilis str. 168 | |
| 43 | QA (BN) | 50S ribosomal protein uL14 | polymer | 122 | 13175.3 | 1 | UniProt (P12875) Pfam (PF00238) | Bacillus subtilis subsp. subtilis str. 168 | |
| 44 | RA (BO) | 50S ribosomal protein uL15 | polymer | 146 | 15410.7 | 1 | UniProt (P19946) Pfam (PF00828) | Bacillus subtilis subsp. subtilis str. 168 | |
| 45 | SA (BP) | 50S ribosomal protein uL16 | polymer | 144 | 16223.0 | 1 | UniProt (P14577) Pfam (PF00252) | Bacillus subtilis subsp. subtilis str. 168 | |
| 46 | TA (BQ) | 50S ribosomal protein bL17 | polymer | 120 | 13774.8 | 1 | UniProt (P20277) Pfam (PF01196) | Bacillus subtilis subsp. subtilis str. 168 | |
| 47 | UA (BR) | 50S ribosomal protein uL18 | polymer | 120 | 12993.8 | 1 | UniProt (P46899) Pfam (PF00861) | Bacillus subtilis subsp. subtilis str. 168 | |
| 48 | VA (BS) | 50S ribosomal protein bL19 | polymer | 115 | 13416.9 | 1 | UniProt (O31742) Pfam (PF01245) | Bacillus subtilis subsp. subtilis str. 168 | |
| 49 | WA (BT) | 50S ribosomal protein bL20 | polymer | 119 | 13669.2 | 1 | UniProt (P55873) Pfam (PF00453) | Bacillus subtilis subsp. subtilis str. 168 | |
| 50 | XA (BU) | 50S ribosomal protein bL21 | polymer | 102 | 11296.1 | 1 | UniProt (P26908) Pfam (PF00829) | Bacillus subtilis subsp. subtilis str. 168 | |
| 51 | YA (BV) | 50S ribosomal protein uL22 | polymer | 113 | 12481.6 | 1 | UniProt (P42060) Pfam (PF00237) | Bacillus subtilis subsp. subtilis str. 168 | |
| 52 | ZA (BW) | 50S ribosomal protein uL23 | polymer | 95 | 10978.8 | 1 | UniProt (P42924) Pfam (PF00276) | Bacillus subtilis subsp. subtilis str. 168 | |
| 53 | AB (BX) | 50S ribosomal protein uL24 | polymer | 103 | 11166.1 | 1 | UniProt (P0CI78) Pfam (PF00467) Pfam (PF17136) | Bacillus subtilis subsp. subtilis str. 168 | |
| 54 | BB (BZ) | 50S ribosomal protein bL27 | polymer | 94 | 10391.9 | 1 | UniProt (P05657) Pfam (PF01016) | Bacillus subtilis subsp. subtilis str. 168 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 54 |
| Total formula weight | 2185399.0 | |
| All* | Total formula weight | 2185399.0 |
