3J0K
Orientation of RNA polymerase II within the human VP16-Mediator-pol II-TFIIF assembly
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | DNA-directed RNA polymerase II largest subunit | polymer | 1455 | 163180.0 | 1 | Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) Pfam (PF04992) Pfam (PF04990) UniProt (by SIFTS) (P04050) In PDB | Homo sapiens (human) | |
| 2 | B | DNA-directed RNA polymerase II 140 kDa polypeptide | polymer | 1224 | 138937.3 | 1 | Pfam (PF04565) Pfam (PF04566) Pfam (PF04567) Pfam (PF00562) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) UniProt (by SIFTS) (P08518) In PDB | Homo sapiens (human) | |
| 3 | C | DNA-directed RNA polymerase II 45 kDa polypeptide | polymer | 268 | 30140.1 | 1 | Pfam (PF01193) Pfam (PF01000) UniProt (by SIFTS) (P16370) In PDB | Homo sapiens (human) | |
| 4 | D | DNA-directed RNA polymerase II 32 kDa polypeptide | polymer | 221 | 25451.2 | 1 | Pfam (PF03874) UniProt (by SIFTS) (P20433) In PDB | Homo sapiens (human) | |
| 5 | E | DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide | polymer | 215 | 25117.1 | 1 | Pfam (PF03871) Pfam (PF01191) UniProt (by SIFTS) (P20434) In PDB | Homo sapiens (human) | |
| 6 | F | DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide | polymer | 84 | 9675.2 | 1 | Pfam (PF01192) UniProt (by SIFTS) (P20435) In PDB | Homo sapiens (human) | |
| 7 | G | DNA-directed RNA polymerase II 19 kDa polypeptide | polymer | 171 | 19081.1 | 1 | Pfam (PF03876) Pfam (PF00575) UniProt (by SIFTS) (P34087) In PDB | Homo sapiens (human) | |
| 8 | H | DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide | polymer | 146 | 16525.4 | 1 | Pfam (PF03870) UniProt (by SIFTS) (P20436) In PDB | Homo sapiens (human) | |
| 9 | I | DNA-directed RNA polymerase II subunit 9 | polymer | 122 | 14308.2 | 1 | Pfam (PF02150) Pfam (PF01096) UniProt (by SIFTS) (P27999) In PDB | Homo sapiens (human) | |
| 10 | J | DNA-directed RNA polymerases I/II/III subunit 10 | polymer | 70 | 8290.7 | 1 | Pfam (PF01194) UniProt (by SIFTS) (P22139) In PDB | Homo sapiens (human) | |
| 11 | K | DNA-directed RNA polymerase II 13.6 kDa polypeptide | polymer | 120 | 13633.5 | 1 | Pfam (PF13656) UniProt (by SIFTS) (P38902) In PDB | Homo sapiens (human) | |
| 12 | L | DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide | polymer | 46 | 5252.3 | 1 | Homo sapiens (human) | ||
| 13 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 14 | A, B, C, I, J... | ZINC ION | non-polymer | 65.4 | 9 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 469592.0 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 613.0 | |
| All* | Total formula weight | 470204.9 |
