3J0J
Fitted atomic models of Thermus thermophilus V-ATPase subunits into cryo-EM map
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | V-type ATP synthase alpha chain | polymer | 578 | 63700.0 | 3 | UniProt (Q56403) Pfam (PF02874) Pfam (PF16886) Pfam (PF00006) Pfam (PF22919) In PDB | Thermus thermophilus | V-ATPase subunit A |
2 | D, E, F | V-type ATP synthase beta chain | polymer | 478 | 53219.5 | 3 | UniProt (Q56404) Pfam (PF02874) Pfam (PF00006) Pfam (PF22919) In PDB | Thermus thermophilus | V-ATPase subunit B |
3 | G | V-type ATP synthase subunit D | polymer | 223 | 24715.6 | 1 | UniProt (O87880) Pfam (PF01813) In PDB | Thermus thermophilus | V-ATPase subunit D |
4 | H | V-type ATP synthase subunit F | polymer | 104 | 11294.9 | 1 | UniProt (P74903) Pfam (PF01990) In PDB | Thermus thermophilus | V-ATPase subunit F |
5 | I, K | V-type ATP synthase, subunit (VAPC-THERM) | polymer | 104 | 11621.4 | 2 | UniProt (Q5SIT5) Pfam (PF16999) In PDB | Thermus thermophilus | |
6 | J, L | V-type ATP synthase subunit E | polymer | 188 | 20699.7 | 2 | UniProt (P74901) Pfam (PF01991) In PDB | Thermus thermophilus | V-ATPase subunit E |
7 | M | V-type ATP synthase subunit C | polymer | 323 | 35968.6 | 1 | UniProt (P74902) Pfam (PF01992) In PDB | Thermus thermophilus | V-ATPase subunit C |
8 | A, C | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) |
Sequence modifications
I, K: 18 - 120 (UniProt: Q5SIT5)
J, L: 1 - 188 (UniProt: P74901)
PDB | External Database | Details |
---|---|---|
Gly 17 | - | EXPRESSION TAG |
PDB | External Database | Details |
---|---|---|
Met 134 | Leu 134 | CONFLICT |
Met 171 | Leu 171 | CONFLICT |
Met 178 | Leu 178 | CONFLICT |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 13 |
Total formula weight | 487379.6 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 854.4 | |
All* | Total formula weight | 488234.0 |