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3IZ0

Human Ndc80 Bonsai Decorated Microtubule

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
alpha tubulin, Chain A from PDB 1JFFpolymer45150107.21Pfam (PF00091)
Pfam (PF03953)
UniProt (by SIFTS) (Q2HJ86)
Bos taurus
2B
(B)
beta tubulin, Chain B from PDB 1JFFpolymer44549907.81Pfam (PF00091)
Pfam (PF03953)
UniProt (by SIFTS) (Q6B856)
Bos taurus
3C, E
(C, E)
NDC80-SPC25 chimera protein, Chain B from PDB 2VE7 (Ndc80 bonsai)polymer31536351.32UniProt (Q05DQ6)
UniProt (Q9HBM1)
Pfam (PF03801)
Pfam (PF18077)
Pfam (PF08234)
UniProt (by SIFTS) (O14777)
Homo sapiens (human)
4D, F
(D, F)
NUF2-SPC24 chimera protein, Chain D from PDB 2VE7 (Ndc80 bonsai)polymer25028993.42UniProt (B1AQT4)
UniProt (C9JGC4)
Pfam (PF03800)
Pfam (PF08286)
UniProt (by SIFTS) (Q9BZD4)
UniProt (by SIFTS) (Q8NBT2)
Homo sapiens (human)
5G
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
6H
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
PubChem (888)
7I
(A)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
PubChem (177679032)
PubChem (135400627)
PubChem (135487750)
PubChem (136088935)
PubChem (136803486)
PubChem (135398633)
PubChem (135544356)
PubChem (135547949)
PubChem (135600366)
PubChem (135749822)
PubChem (136005188)
PubChem (136073923)
PubChem (136240914)
PubChem (136664747)
PubChem (136772743)
PubChem (136772744)
PubChem (136803487)
PubChem (137286749)
PubChem (164715984)
PubChem (171699466)
8J
(B)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
PubChem (136073927)
PubChem (135398619)
PubChem (135402030)
PubChem (135431654)
PubChem (135566337)
PubChem (135760556)
PubChem (136026707)
PubChem (136053418)
PubChem (136663964)
PubChem (136664748)
PubChem (136759848)
PubChem (136759849)
PubChem (136759850)
PubChem (136836636)
PubChem (136847074)
PubChem (172898537)
9K
(B)
TAXOLnon-polymer853.91Chemie (TA1)
PubChem (16757828)
PubChem (16760674)
PubChem (21458255)
PubChem (23307219)
PubChem (23412627)
PubChem (23636632)
PubChem (24848897)
PubChem (24867246)
PubChem (16760177)
PubChem (16742549)
PubChem (21733096)
PubChem (23307242)
PubChem (23307253)
PubChem (23307913)
PubChem (24754091)
PubChem (24207713)
PubChem (24791027)
PubChem (25200067)
PubChem (42613129)
PubChem (42620039)
PubChem (44155032)
PubChem (44276363)
PubChem (44279927)
PubChem (44335735)
PubChem (44291178)
PubChem (44328863)
PubChem (44342632)
PubChem (44356895)
PubChem (44378736)
PubChem (45489039)
PubChem (46782671)
PubChem (71209844)
PubChem (53313247)
PubChem (53298534)
PubChem (54259297)
PubChem (54259299)
PubChem (57489669)
PubChem (57999380)
PubChem (58460861)
PubChem (58777027)
PubChem (58798493)
PubChem (58596717)
PubChem (59048611)
PubChem (59042813)
PubChem (58877402)
PubChem (44323108)
PubChem (44356961)
PubChem (44403716)
PubChem (60005248)
PubChem (59873251)
PubChem (59914794)
PubChem (59919147)
PubChem (60123436)
PubChem (60011010)
PubChem (60147315)
PubChem (66795656)
PubChem (14060298)
PubChem (46781469)
PubChem (176586897)
PubChem (177678861)
PubChem (36314)
PubChem (60915)
PubChem (177409)
PubChem (184492)
PubChem (70801836)
PubChem (70842048)
PubChem (70848451)
PubChem (70856170)
PubChem (441276)
PubChem (73707502)
PubChem (73759704)
PubChem (89493063)
PubChem (89847578)
PubChem (90057663)
PubChem (91122402)
PubChem (91885464)
PubChem (49868078)
PubChem (5317123)
PubChem (5321715)
PubChem (101920282)
PubChem (5352019)
PubChem (121459571)
PubChem (122361554)
PubChem (6604028)
PubChem (6604616)
PubChem (6604814)
PubChem (6713921)
PubChem (6915727)
PubChem (124747272)
PubChem (124893098)
PubChem (9875988)
PubChem (54259298)
PubChem (126968948)
PubChem (129395998)
PubChem (129627423)
PubChem (10748131)
PubChem (132517454)
PubChem (11320430)
PubChem (11354895)
PubChem (134368714)
PubChem (134972678)
PubChem (137705323)
PubChem (138106885)
PubChem (140731501)
PubChem (140512017)
PubChem (146034004)
PubChem (153289350)
PubChem (154037993)
PubChem (57908851)
PubChem (57946364)
PubChem (155982214)
PubChem (159121804)
PubChem (160053861)
PubChem (159716711)
PubChem (160171678)
PubChem (160585530)
PubChem (163077211)
PubChem (163077212)
PubChem (163077209)
PubChem (163284947)
PubChem (58803237)
PubChem (168322423)
PubChem (169917882)
PubChem (171036874)
PubChem (175758871)
PubChem (59844545)
PubChem (59904698)
PubChem (60123443)
PubChem (70943371)
PubChem (71096818)
PubChem (73759783)
PubChem (101598423)
PubChem (118528174)
PubChem (4666)
PubChem (124747271)
PubChem (124747273)
PubChem (124747274)
PubChem (5460441)
PubChem (126761000)
PubChem (9854162)
PubChem (9897470)
PubChem (10033513)
PubChem (10485732)
PubChem (11506104)
PubChem (11828953)
PubChem (14060299)
PubChem (14060304)
PubChem (14060306)
PubChem (14060309)
PubChem (15983941)
PubChem (133052515)
PubChem (133640187)
PubChem (134715514)
PubChem (143890766)
PubChem (152743329)
PubChem (154828192)
PubChem (144453087)
PubChem (160585532)
PubChem (163077210)
PubChem (163077213)
PubChem (163077214)
PubChem (163077215)
PubChem (165084161)
PubChem (166711459)
PubChem (167423928)
PubChem (170014955)
PubChem (170362150)
Sequence modifications
C, E: 80 - 286 (UniProt: Q05DQ6)
PDBExternal DatabaseDetails
Met 79-expression tag
C, E: 287 - 393 (UniProt: Q9HBM1)
PDBExternal DatabaseDetails
Gln 393Asn 224conflict
D, F: 1 - 169 (UniProt: B1AQT4)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
Leu -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Gly 72Glu 72engineered mutation
D, F: 170 - 245 (UniProt: C9JGC4)
PDBExternal DatabaseDetails
Glu 200Asp 152conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight230704.4
Non-Polymers*Number of molecules5
Total formula weight1910.0
All*Total formula weight232614.4
*Water molecules are not included.

253795

PDB entries from 2026-05-20

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