3IB1
Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of C-lobe complex with indomethacin
Replaces: 2ALTReplaces: 3HWZEntity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Lactotransferrin | polymer | 345 | 37655.5 | 1 | UniProt (P24627) Pfam (PF00405) | Bos taurus (Bovine) | Lactoferrin, Lactoferricin-B, Lfcin-B |
2 | B (B) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
3 | C (C) | alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G62783KT) | |||
4 | D, E (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | F (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
6 | G (A) | CARBONATE ION | non-polymer | 60.0 | 1 | Chemie (CO3) | |||
7 | H (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
8 | I (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
9 | J (A) | INDOMETHACIN | non-polymer | 357.8 | 1 | Chemie (IMN) | |||
10 | K (A) | water | water | 18.0 | 244 | Chemie (HOH) |
Sequence modifications
A: 342 - 686 (UniProt: P24627)
PDB | External Database | Details |
---|---|---|
Lys 565 | Asn 584 | SEE SEQUENCE DETAILS |
Glu 608 | Lys 627 | SEE SEQUENCE DETAILS |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 37655.5 | |
Branched | Number of molecules | 2 |
Total formula weight | 1659.5 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 921.7 | |
All* | Total formula weight | 40236.7 |