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3HNA

Crystal structure of catalytic domain of human euchromatic histone methyltransferase 1 in complex with SAH and mono-Methylated H3K9 Peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histone-lysine N-methyltransferase, H3 lysine-9 specific 5polymer28732974.32UniProt (Q9H9B1)
Pfam (PF05033)
Pfam (PF00856)
Homo sapiens (human)Histone H3-K9 methyltransferase 5, H3-K9-HMTase 5, Euchromatic histone-lysine N-methyltransferase 1, Eu-HMTase1, G9a-like protein 1, GLP1, Lysine N-methyltransferase 1D
2C, D
(P, Q)
Mono-Methylated H3K9 Peptidepolymer111264.52
3E, J
(A, B)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
4F, G, H, I, K...
(A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
5O, P, Q, R
(A, B, P, Q)
waterwater18.0888Chemie (HOH)
Sequence modifications
A, B: 951 - 1235 (UniProt: Q9H9B1)
PDBExternal DatabaseDetails
Gly 949-expression tag
Ser 950-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight68477.6
Non-Polymers*Number of molecules10
Total formula weight1292.1
All*Total formula weight69769.7
*Water molecules are not included.

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PDB entries from 2025-07-23

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