3HDL
Crystal Structure of Highly Glycosylated Peroxidase from Royal Palm Tree
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Royal Palm Tree Peroxidase | polymer | 304 | 31874.7 | 1 | Pfam (PF00141) UniProt (by SIFTS) (D1MPT2) | Roystonea regia | |
| 2 | B (B) | alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][beta-D-xylofuranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1189.1 | 1 | In PDB GlyTouCan (G46151MM) | |||
| 3 | C (C) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G01388RZ) | |||
| 4 | D, E (D, E) | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G11971MR) | |||
| 5 | F (F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 6 | G (G) | alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB GlyTouCan (G85633VC) | |||
| 7 | H (A) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 1 | Chemie (HEM) | |||
| 8 | I, J (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 9 | K (A) | HYDROGEN PEROXIDE | non-polymer | 34.0 | 1 | Chemie (PEO) | |||
| 10 | L, M, N, O, P... (A) | SULFATE ION | non-polymer | 96.1 | 8 | Chemie (SO4) | |||
| 11 | T (A) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
| 12 | AA, BA, CA, DA, EA... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 16 | Chemie (EDO) | |||
| 13 | KA, LA, MA (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 14 | NA (A) | water | water | 18.0 | 586 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 31874.7 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 4706.4 | |
| Non-Polymers* | Number of molecules | 32 |
| Total formula weight | 3351.1 | |
| All* | Total formula weight | 39932.2 |
