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3H42

Crystal structure of PCSK9 in complex with Fab from LDLR competitive antibody

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Proprotein convertase subtilisin/kexin type 9polymer12614107.81UniProt (Q8NBP7)
Pfam (PF05922)
Homo sapiens (human)Proprotein convertase PC9, Subtilisin/kexin-like protease PC9, Neural apoptosis-regulated convertase 1, NARC-1
2B
(B)
Proprotein convertase subtilisin/kexin type 9polymer54057328.61UniProt (Q8NBP7)
Pfam (PF00082)
Pfam (PF18459)
Pfam (PF18464)
Pfam (PF18463)
Homo sapiens (human)Proprotein convertase PC9, Subtilisin/kexin-like protease PC9, Neural apoptosis-regulated convertase 1, NARC-1
3C
(L)
Fab from LDLR competitive antibody: Light chainpolymer21722626.91Homo sapiens (human)
4D
(H)
Fab from LDLR competitive antibody: Heavy chainpolymer23825489.31Homo sapiens (human)
5E
(B)
SODIUM IONnon-polymer23.01Chemie (NA)
6F, G, H, I
(A, B, L, H)
waterwater18.0568Chemie (HOH)
Sequence modifications
A: 31 - 152 (UniProt: Q8NBP7)
PDBExternal DatabaseDetails
Gly 27-expression tag
Ala 28-expression tag
Met 29-expression tag
Gly 30-expression tag
B: 153 - 692 (UniProt: Q8NBP7)
PDBExternal DatabaseDetails
Ala 533Asn 533engineered mutation
Gly 620Glu 620SEE REMARK 999
H: 1 - 232 (PDB: 3H42)
PDBExternal DatabaseDetails
His 233-expression tag
His 234-expression tag
His 235-expression tag
His 236-expression tag
His 237-expression tag
His 238-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight119552.6
Non-Polymers*Number of molecules1
Total formula weight23.0
All*Total formula weight119575.6
*Water molecules are not included.

246905

PDB entries from 2025-12-31

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