3GPU
MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC4-loop deletion complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA glycosylase | polymer | 256 | 28812.5 | 1 | UniProt (P84131) Pfam (PF01149) Pfam (PF06831) Pfam (PF06827) In PDB | Geobacillus stearothermophilus (Geobacillus stearothermophilus) | |
2 | B | DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3') | polymer | 16 | 4948.2 | 1 | |||
3 | C | DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3') | polymer | 16 | 4866.1 | 1 | |||
4 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
5 | water | water | 18.0 | 287 | Chemie (HOH) |
Sequence modifications
A: 2 - 274 (UniProt: P84131)
PDB | External Database | Details |
---|---|---|
Glu 3 | Gln 3 | conflict |
Cys 166 | Gln 166 | engineered mutation |
- | Gly 219 | deletion |
- | Ser 220 | deletion |
- | Thr 221 | deletion |
- | Val 222 | deletion |
- | Arg 223 | deletion |
- | Thr 224 | deletion |
- | Tyr 225 | deletion |
- | Val 226 | deletion |
- | Asn 227 | deletion |
- | Thr 228 | deletion |
- | Gln 229 | deletion |
- | Gly 230 | deletion |
- | Glu 231 | deletion |
- | Ala 232 | deletion |
- | Gly 233 | deletion |
- | Thr 234 | deletion |
- | Phe 235 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 38626.8 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 65.4 | |
All* | Total formula weight | 38692.2 |