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3GJ8

Crystal structure of human RanGDP-Nup153ZnF34 complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
GTP-binding nuclear protein Ranpolymer22124846.52UniProt (P62826)
Pfam (PF00071)
Homo sapiens (human)GTPase Ran, Ras-related nuclear protein, Ras-like protein TC4, Androgen receptor-associated protein 24
2B, D
(B, D)
Nuclear pore complex protein Nup153polymer929394.62UniProt (P49791)
Pfam (PF00641)
Rattus norvegicus (rat)Nucleoporin Nup153, 153 kDa nucleoporin
3E, G, I, J
(A, C)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
4F, K
(A, C)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.22Chemie (GDP)
5H, L
(B, D)
ZINC IONnon-polymer65.42Chemie (ZN)
6M, N, O, P
(A, B, C, D)
waterwater18.0548Chemie (HOH)
Sequence modifications
A, C: 2 - 216 (UniProt: P62826)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
His -2-expression tag
Met -1-expression tag
Ala 0-expression tag
Ser 1-expression tag
Ser 35Phe 35engineered mutation
B, D: 790 - 876 (UniProt: P49791)
PDBExternal DatabaseDetails
Gly 785-expression tag
Pro 786-expression tag
Leu 787-expression tag
Gly 788-expression tag
Ser 789-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight68482.2
Non-Polymers*Number of molecules8
Total formula weight1114.4
All*Total formula weight69596.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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