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3EX7

The crystal structure of EJC in its transition state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Protein mago nashi homologpolymer14617189.62UniProt (P61326)
Pfam (PF02792)
Homo sapiens (human)
2B, F
(B, G)
RNA-binding protein 8Apolymer12614637.22UniProt (Q9Y5S9)
Pfam (PF00076)
Homo sapiens (human)RNA-binding motif protein 8A, Ribonucleoprotein RBM8A, RNA-binding protein Y14, Binder of OVCA1-1, BOV-1
3C, G
(C, H)
Eukaryotic initiation factor 4A-IIIpolymer41347173.22UniProt (P38919)
Pfam (PF00270)
Pfam (PF00271)
Homo sapiens (human)Eukaryotic translation initiation factor 4A isoform 3, ATP-dependent RNA helicase eIF4A-3, ATP-dependent RNA helicase DDX48, DEAD box protein 48, Eukaryotic initiation factor 4A-like NUK-34, Nuclear matrix protein 265, hNMP 265
4D, H
(D, I)
Protein CASC3polymer14617275.12UniProt (O15234)
Pfam (PF09405)
Homo sapiens (human)Cancer susceptibility candidate gene 3 protein, Metastatic lymph node protein 51, Protein MLN 51, Protein barentsz, Btz
5I, J
(F, J)
RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')polymer61792.02
6K, N
(C, H)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
7L, O
(C, H)
ALUMINUM FLUORIDEnon-polymer84.02Chemie (AF3)
8M, P
(C, H)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
9Q, R, S, T, U...
(A, B, C, D, E...)
waterwater18.0380Chemie (HOH)
Sequence modifications
B, G: 51 - 174 (UniProt: Q9Y5S9)
PDBExternal DatabaseDetails
Leu 175-expression tag
Glu 176-expression tag
C, H: 1 - 411 (UniProt: P38919)
PDBExternal DatabaseDetails
Leu 412-expression tag
Glu 413-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight196134.3
Non-Polymers*Number of molecules6
Total formula weight1071.0
All*Total formula weight197205.2
*Water molecules are not included.

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PDB entries from 2024-11-13

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