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3EPW

Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-1-[(4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidin-3,4-diol

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BIAG-nucleoside hydrolasepolymer33837621.92UniProt (Q9GPQ4)
Pfam (PF01156)
In PDB
Trypanosoma vivax
2A, BCALCIUM IONnon-polymer40.12Chemie (CA)
3A, B7-(((2R,3R,4S)-3,4-dihydroxy-2-(hydroxymethyl)pyrrolidin-1-yl)methyl)-3H-pyrrolo[3,2-d]pyrimidin-4(5H)-onenon-polymer280.32Chemie (JMQ)
4A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
5waterwater18.0838Chemie (HOH)
Sequence modifications
A, B: 2 - 327 (UniProt: Q9GPQ4)
PDBExternal DatabaseDetails
Met -10-expression tag
Arg -9-expression tag
Gly -8-expression tag
Ser -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
Gly 0-expression tag
Ser 1-expression tag
Asn 301Lys 301conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight75243.7
Non-Polymers*Number of molecules6
Total formula weight689.3
All*Total formula weight75933.1
*Water molecules are not included.

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PDB entries from 2024-07-17

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