3EE3

Crystal structure of Acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with CDP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E...	Nucleoside diphosphate kinase	polymer	142	16301.5	6	UniProt (Q5UQL3) Pfam (PF00334) In PDB	Acanthamoeba polyphaga mimivirus	NDP kinase, NDK
2	A, B, C, D, E...	CYTIDINE-5'-DIPHOSPHATE	non-polymer		403.2	6	Chemie (CDP)
3	A, B, C, D, E...	MAGNESIUM ION	non-polymer		24.3	6	Chemie (MG)
4		water	water		18.0	157	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F: 2 - 137 (UniProt: Q5UQL3)

PDB	External Database	Details
Tyr -4	-	expression tag
Lys -3	-	expression tag
Lys -2	-	expression tag
Ala -1	-	expression tag
Gly 0	-	expression tag
Leu 1	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	97809.0
Non-Polymers*	Number of molecules	12
	Total formula weight	2564.9
All*	Total formula weight	100373.9

*Water molecules are not included.