3ECB
Crystal structure of mouse H-2Dd in complex with peptide P18-I10 derived from human immunodeficiency virus envelope glycoprotein 120
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | H-2 class I histocompatibility antigen, D-D alpha chain | polymer | 277 | 32265.9 | 1 | UniProt (P01900) Pfam (PF00129) Pfam (PF07654) In PDB | Mus musculus (mouse) | H-2D(D) |
| 2 | B | Beta-2 microglobulin | polymer | 100 | 11791.5 | 1 | UniProt (Q91XJ8) Pfam (PF07654) UniProt (by SIFTS) (P01887) In PDB | Mus musculus (mouse) | |
| 3 | P | Peptide P18-I10 from HIV gp160 | polymer | 10 | 1075.3 | 1 | UniProt (P19551) In PDB | Env polyprotein, Surface protein, SU, Glycoprotein 120, gp120, Transmembrane protein, TM, Glycoprotein 41, gp41 | |
| 4 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 6 | Chemie (EDO) | |||
| 5 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | water | water | 18.0 | 315 | Chemie (HOH) |
Sequence modifications
A: 2 - 277 (UniProt: P01900)
B: 1 - 99 (UniProt: Q91XJ8)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 45132.7 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 396.7 | |
| All* | Total formula weight | 45529.4 |
