3DNO
Molecular structure for the HIV-1 gp120 trimer in the CD4-bound state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G (A, D, G) | HIV-1 envelope glycoprotein gp120 | polymer | 35 | 4225.8 | 3 | UniProt (P04578) | HIV-1 M:B_HXB2R | SU, Glycoprotein 120, gp120 |
| 2 | B, E, H (B, E, H) | HIV-1 envelope glycoprotein gp120 | polymer | 170 | 18570.0 | 3 | UniProt (P04578) Pfam (PF00516) | HIV-1 M:B_HXB2R | SU, Glycoprotein 120, gp120 |
| 3 | C, F, I (C, F, I) | HIV-1 envelope glycoprotein gp120 | polymer | 83 | 9330.7 | 3 | UniProt (P04578) | HIV-1 M:B_HXB2R | SU, Glycoprotein 120, gp120 |
Sequence modifications
B, E, H: 198 - 297 (UniProt: P04578)
B, E, H: 330 - 396 (UniProt: P04578)
B, E, H: 330 - 396 (UniProt: P04578)
| PDB | External Database | Details |
|---|---|---|
| Gly 298 | - | linker |
| Ala 299 | - | linker |
| Gly 329 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 96379.7 | |
| All* | Total formula weight | 96379.7 |
