3DNO
Molecular structure for the HIV-1 gp120 trimer in the CD4-bound state
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0019031 | cellular_component | viral envelope |
| B | 0019031 | cellular_component | viral envelope |
| C | 0019031 | cellular_component | viral envelope |
| D | 0019031 | cellular_component | viral envelope |
| E | 0019031 | cellular_component | viral envelope |
| F | 0019031 | cellular_component | viral envelope |
| G | 0019031 | cellular_component | viral envelope |
| H | 0019031 | cellular_component | viral envelope |
| I | 0019031 | cellular_component | viral envelope |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 30 |
| Details | Region: {"description":"CD4-binding loop","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11188697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14981267","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26972002","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11188697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14981267","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23539181","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26972002","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9641677","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 12 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11188697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14981267","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26972002","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9641677","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11188697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14981267","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9641677","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"21998254","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26972002","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9641677","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 6 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11188697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26972002","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9641677","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17301785","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19965434","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2NY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3IDX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3IDY","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 30 |
| Details | Region: {"description":"V5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 24 |
| Details | Region: {"description":"V5","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11188697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14981267","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
