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3CM2

Crystal Structure of XIAP BIR3 domain in complex with a Smac-mimetic compound, Smac010

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(D, A, B, C, E...)
Baculoviral IAP repeat-containing protein 4polymer13014675.310UniProt (P98170)
Pfam (PF00653)
Homo sapiens (Human)E3 ubiquitin-protein ligase XIAP, Inhibitor of apoptosis protein 3, X- linked inhibitor of apoptosis protein, X-linked IAP, IAP-like protein, HILP
2AA, CA, K, M, O...
(I, J, D, A, B...)
ZINC IONnon-polymer65.410Chemie (ZN)
3BA, DA, L, N, P...
(I, J, D, A, B...)
(3S,6S,7R,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-7-(aminomethyl)-N-(diphenylmethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamidenon-polymer491.610Chemie (X23)
PubChem (25011738)
PubChem (71014995)
PubChem (74388548)
PubChem (143802284)
4EA, FA, GA, HA, IA...
(D, A, B, C, E...)
waterwater18.0238Chemie (HOH)
Sequence modifications
D, A, B, C, E, F, G, H, I, J: 241 - 356 (UniProt: P98170)
PDBExternal DatabaseDetails
Met 227-expression tag
Ala 228-expression tag
Ser 229-expression tag
Met 230-expression tag
Thr 231-expression tag
Gly 232-expression tag
Gly 233-expression tag
Gln 234-expression tag
Gln 235-expression tag
Met 236-expression tag
Gly 237-expression tag
Arg 238-expression tag
Gly 239-expression tag
Ser 240-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight146753.4
Non-Polymers*Number of molecules20
Total formula weight5570.3
All*Total formula weight152323.7
*Water molecules are not included.

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PDB entries from 2026-04-01

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