3C5X
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at low pH
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Envelope protein E | polymer | 402 | 44801.4 | 1 | UniProt (O09234) Pfam (PF00869) Pfam (PF02832) UniProt (by SIFTS) (Q6H1E5) | Dengue virus 2 Thailand/16681/84 | |
| 2 | B (C) | prM | polymer | 130 | 14870.9 | 1 | UniProt (O09234) Pfam (PF01570) Pfam (PF01004) UniProt (by SIFTS) (Q3BCY3) | Dengue virus 2 | |
| 3 | C (B) | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G07375KG) | |||
| 4 | D (D) | beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]alpha-D-altropyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G43142BR) | |||
| 5 | E, F (A, C) | water | water | 18.0 | 84 | Chemie (HOH) |
Sequence modifications
A: 1 - 394 (UniProt: O09234)
C: 1 - 130 (UniProt: O09234)
| PDB | External Database | Details |
|---|---|---|
| Gly -7 | - | expression tag |
| Glu -6 | - | expression tag |
| Asn -5 | - | expression tag |
| Leu -4 | - | expression tag |
| Tyr -3 | - | expression tag |
| Phe -2 | - | expression tag |
| Gln -1 | - | expression tag |
| Gly 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 87 | Arg 201 | engineered mutation |
| Thr 88 | Arg 202 | engineered mutation |
| Ser 91 | Arg 205 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 59672.3 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1335.2 | |
| All* | Total formula weight | 61007.5 |
