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3C5D

Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
'HIV-1 subtype F genomic RNApolymer237463.52
2C, F
(A, B)
POTASSIUM IONnon-polymer39.12Chemie (K)
3D, E
(B)
(2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R ,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMET HYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOLnon-polymer761.82Chemie (LIV)
4G, H
(A, B)
waterwater18.0140Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight14926.9
Non-Polymers*Number of molecules4
Total formula weight1601.7
All*Total formula weight16528.7
*Water molecules are not included.

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PDB entries from 2025-06-18

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