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3BY0

Crystal structure of Siderocalin (NGAL, Lipocalin 2) W79A-R81A complexed with Ferric Enterobactin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Neutrophil gelatinase-associated lipocalinpolymer19822396.73UniProt (P80188)
Pfam (PF00061)
Homo sapiens (human)NGAL; p25; 25 kDa alpha-2-microglobulin-related subunit of MMP-9; Lipocalin-2; Oncogene 24p3
2D, J, L
(A, B, C)
FE (III) IONnon-polymer55.83Chemie (FE)
3E, M
(A, C)
SULFATE IONnon-polymer96.12Chemie (SO4)
4F, N, O
(A, C)
2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACIDnon-polymer241.23Chemie (DBS)
5G, H, K, P
(A, B, C)
2,3-DIHYDROXY-BENZOIC ACIDnon-polymer154.14Chemie (DBH)
6I, Q, R
(A, C)
GLYCEROLnon-polymer92.13Chemie (GOL)
7S, T, U
(A, B, C)
waterwater18.078Chemie (HOH)
Sequence modifications
A, B, C: -19 - 178 (UniProt: P80188)
PDBExternal DatabaseDetails
Ala 79Trp 99engineered mutation
Ala 81Arg 101engineered mutation
Ser 87Cys 107engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight67190.1
Non-Polymers*Number of molecules15
Total formula weight1976.0
All*Total formula weight69166.2
*Water molecules are not included.

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PDB entries from 2025-12-10

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