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3BY0

Crystal structure of Siderocalin (NGAL, Lipocalin 2) W79A-R81A complexed with Ferric Enterobactin

Functional Information from GO Data
ChainGOidnamespacecontents
A0036094molecular_functionsmall molecule binding
B0036094molecular_functionsmall molecule binding
C0036094molecular_functionsmall molecule binding
Functional Information from PDB Data
site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 531
ChainResidue
AASN164
AHIS165
CLYS75

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 532
ChainResidue
ALYS75
CPRO162
CASN164
CHIS165

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DBS A 191
ChainResidue
APHE123
ALYS125
ATYR132
ALYS134
AALA40
ATYR106

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE DBH A 192
ChainResidue
ASER68
ALYS134

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DBH A 193
ChainResidue
AALA81
ATYR100
ALEU103
ATYR106
ALYS125

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE DBH B 201
ChainResidue
BALA40
BTYR106
BLYS134

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DBS C 301
ChainResidue
CILE41
CTYR106
CPHE123
CLYS125
CTYR132
CLYS134

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBS C 302
ChainResidue
CSER68
CALA79
CALA81
CPHE83
CLEU94
CTYR100
CTYR106
CLYS125

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE DBH C 303
ChainResidue
CARG72
CLYS134

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 601
ChainResidue
AASN114
AHIS118
BASN116

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL C 602
ChainResidue
CTHR93
CLEU94
CSER105
CTYR106

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL C 603
ChainResidue
CLYS59
CGLU60
CASP61

Functional Information from PROSITE/UniProt
site_idPS00213
Number of Residues14
DetailsLIPOCALIN Lipocalin signature. NFQdnQFQGKWYVV
ChainResidueDetails
AASN21-VAL34

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PDB","id":"1X89","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1X8U","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PDB","id":"3CMP","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15642259","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1X89","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1X8U","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"10684642","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15084671","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16335952","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16740002","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"7683678","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DFV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QQS","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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