3BDJ
Crystal Structure of Bovine Milk Xanthine Dehydrogenase with a Covalently Bound Oxipurinol Inhibitor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Xanthine dehydrogenase/oxidase | polymer | 1332 | 146993.1 | 2 | UniProt (P80457) Pfam (PF00111) Pfam (PF01799) Pfam (PF00941) Pfam (PF03450) Pfam (PF01315) Pfam (PF02738) Pfam (PF20256) | Bos taurus (Bovine) | |
| 2 | C, N (A, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 3 | D, E, O, P (A, B) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 4 | Chemie (FES) | |||
| 4 | F, Q (A, B) | PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER | non-polymer | 395.4 | 2 | Chemie (MTE) | |||
| 5 | G, R (A, B) | Oxo(sulfanyl)molybdenum(IV) ION | non-polymer | 145.0 | 2 | Chemie (MOW) | |||
| 6 | H, S (A, B) | FLAVIN-ADENINE DINUCLEOTIDE | non-polymer | 785.5 | 2 | Chemie (FAD) | |||
| 7 | I, T (A, B) | Oxypurinol | non-polymer | 152.1 | 2 | Chemie (141) | |||
| 8 | J, K, L, U, V... (A, B) | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
| 9 | M, Y (A, B) | CARBONATE ION | non-polymer | 60.0 | 2 | Chemie (CO3) | |||
| 10 | AA, Z (B, A) | water | water | 18.0 | 1394 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 1332 (UniProt: P80457)
| PDB | External Database | Details |
|---|---|---|
| His 552 | Asp 552 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 293986.3 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 4504.2 | |
| All* | Total formula weight | 298490.4 |
