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3B2R

Crystal Structure of PDE5A1 catalytic domain in complex with Vardenafil

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
cGMP-specific 3',5'-cyclic phosphodiesterasepolymer33038202.02UniProt (O76074)
Pfam (PF00233)
Homo sapiens (Human)CGB-PDE, cGMP-binding cGMP-specific phosphodiesterase
2C, D
(A, B)
2-{2-ETHOXY-5-[(4-ETHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-5-METHYL-7-PROPYLIMIDAZO[5,1-F][1,2,4]TRIAZIN-4(1H)-ONEnon-polymer488.62Chemie (VDN)
3E, F
(A, B)
waterwater18.0183Chemie (HOH)
Sequence modifications
A, B: 535 - 860 (UniProt: O76074)
PDBExternal DatabaseDetails
Gly 531-expression tag
Ser 532-expression tag
His 533-expression tag
Met 534-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight76404.0
Non-Polymers*Number of molecules2
Total formula weight977.2
All*Total formula weight77381.2
*Water molecules are not included.

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PDB entries from 2025-07-16

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