3AL8
Plexin A2 / Semaphorin 6A complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Semaphorin-6A | polymer | 556 | 62863.4 | 1 | UniProt (O35464) Pfam (PF01403) Pfam (PF01437) | Mus musculus (mouse) | Semaphorin VIA, Sema VIA, Semaphorin-6A-1, SEMA6A-1, Semaphorin Q, Sema Q |
| 2 | B (B) | Plexin-A2 | polymer | 539 | 60185.1 | 1 | UniProt (P70207) Pfam (PF01403) Pfam (PF01437) | Mus musculus (mouse) | Plexin-2, Plex 2 |
| 3 | C, D (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | E (E) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G55220VL) | |||
| 5 | F, G, H (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A: 19 - 570 (UniProt: O35464)
B: 31 - 561 (UniProt: P70207)
| PDB | External Database | Details |
|---|---|---|
| Gly 15 | - | expression tag |
| Ser 16 | - | expression tag |
| Ser 17 | - | expression tag |
| Arg 18 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 562 | - | expression tag |
| Arg 563 | - | expression tag |
| Glu 564 | - | expression tag |
| Asn 565 | - | expression tag |
| Leu 566 | - | expression tag |
| Tyr 567 | - | expression tag |
| Phe 568 | - | expression tag |
| Gln 569 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 123048.5 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 2083.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 125796.0 |
