3AL8
Plexin A2 / Semaphorin 6A complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Semaphorin-6A | polymer | 556 | 62863.4 | 1 | UniProt (O35464) Pfam (PF01403) Pfam (PF01437) In PDB | Mus musculus (mouse) | Semaphorin VIA, Sema VIA, Semaphorin-6A-1, SEMA6A-1, Semaphorin Q, Sema Q |
2 | B | Plexin-A2 | polymer | 539 | 60185.1 | 1 | UniProt (P70207) Pfam (PF01403) Pfam (PF01437) In PDB | Mus musculus (mouse) | Plexin-2, Plex 2 |
3 | C, D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
4 | E | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G55220VL) | |||
5 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A: 19 - 570 (UniProt: O35464)
B: 31 - 561 (UniProt: P70207)
PDB | External Database | Details |
---|---|---|
Gly 15 | - | expression tag |
Ser 16 | - | expression tag |
Ser 17 | - | expression tag |
Arg 18 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 562 | - | expression tag |
Arg 563 | - | expression tag |
Glu 564 | - | expression tag |
Asn 565 | - | expression tag |
Leu 566 | - | expression tag |
Tyr 567 | - | expression tag |
Phe 568 | - | expression tag |
Gln 569 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 123048.5 | |
Branched | Number of molecules | 3 |
Total formula weight | 2083.9 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 663.6 | |
All* | Total formula weight | 125796.0 |