3AL8
Plexin A2 / Semaphorin 6A complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-16 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 240.870, 240.870, 146.745 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.150 - 3.600 |
R-factor | 0.23316 |
Rwork | 0.230 |
R-free | 0.28733 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.098 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.150 | 3.790 |
High resolution limit [Å] | 3.600 | 3.600 |
Rmerge | 0.097 | 0.417 |
Number of reflections | 29317 | |
<I/σ(I)> | 17.1 | 4 |
Completeness [%] | 99.5 | 99.8 |
Redundancy | 6.5 | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 18-25% (wt./vol.) PEG 1000, 0.2-0.3M MgCl2, 0.1M Na-cacodylate pH 5.5-6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |