3AKH
Crystal structure of exo-1,5-alpha-L-arabinofuranosidase complexed with alpha-1,5-L-arabinofuranotriose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Putative secreted alpha L-arabinofuranosidase II | polymer | 468 | 51937.3 | 1 | UniProt (Q82P90) Pfam (PF04616) Pfam (PF05270) | Streptomyces avermitilis | |
| 2 | B, C, D (B, C, D) | alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose | branched | 282.2 | 3 | In PDB GlyTouCan (G41001SE) | |||
| 3 | E (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 4 | F (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 5 | G (A) | alpha-L-arabinofuranose | non-polymer | 150.1 | 1 | Chemie (AHR) | |||
| 6 | H, I (A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 7 | J (A) | water | water | 18.0 | 578 | Chemie (HOH) |
Sequence modifications
A: 1 - 454 (UniProt: Q82P90)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
| Lys 455 | - | expression tag |
| Leu 456 | - | expression tag |
| Ala 457 | - | expression tag |
| Ala 458 | - | expression tag |
| Ala 459 | - | expression tag |
| Leu 460 | - | expression tag |
| Glu 461 | - | expression tag |
| His 462 | - | expression tag |
| His 463 | - | expression tag |
| His 464 | - | expression tag |
| His 465 | - | expression tag |
| His 466 | - | expression tag |
| His 467 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 51937.3 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 846.7 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 392.8 | |
| All* | Total formula weight | 53176.8 |






