38LQ
Structure of Staphylococcus aureus Y131F DNA gyrase GK-del fusion construct in complex with 20 bp DNA and OSU-276
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | DNA gyrase subunit B,DNA gyrase subunit A | polymer | 693 | 78166.1 | 2 | UniProt (P66936) UniProt (Q99XG5) | Staphylococcus aureus | |
| 2 | C, D (C, D) | DNA (5'-D(P*AP*GP*CP*CP*GP*TP*AP*GP*GP*GP*CP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3') | polymer | 20 | 6136.0 | 2 | Staphylococcus aureus | ||
| 3 | E, I (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) PubChem (27854) | |||
| 4 | F, G, H, J, K... (A, B) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 5 | M (C) | (6P)-6-(1-{1-[2-(3-fluoro-6-methoxy-1,5-naphthyridin-4-yl)ethyl]piperidin-4-yl}-1H-1,2,3-triazol-4-yl)-2H-1,4-benzoxazin-3(4H)-one | non-polymer | 503.5 | 1 | Chemie (A1DMB) | |||
| 6 | N, O, P, Q (A, B, C, D) | water | water | 18.0 | 928 | Chemie (HOH) |
Sequence modifications
A, B: 410 - 543 (UniProt: P66936)
A, B: 580 - 1001 (UniProt: P66936)
A, B: 1002 - 1491 (UniProt: Q99XG5)
| PDB | External Database | Details |
|---|---|---|
| Gly 408 | - | expression tag |
| Met 409 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Thr 544 | - | linker |
| Gly 545 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Phe 1123 | Tyr 123 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 168604.0 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1189.8 | |
| All* | Total formula weight | 169793.8 |
