30PU
Structure of a TrkB:BDNF complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | BDNF/NT-3 growth factors receptor | polymer | 392 | 43895.6 | 2 | UniProt (Q16620) | Homo sapiens (human) | GP145-TrkB,Trk-B,Neurotrophic tyrosine kinase receptor type 2,TrkB tyrosine kinase,Tropomyosin-related kinase B |
| 2 | B, D (B, D) | Neurotrophic factor BDNF precursor form | polymer | 119 | 13535.6 | 2 | UniProt (P23560) | Homo sapiens (human) | proBDNF,Abrineurin,Brain-derived neurotrophic factor |
| 3 | E (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | F, G, H, I, J (A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 5 | Chemie (NAG) PubChem (24139) |
Sequence modifications
A, C: 3 - 383 (UniProt: Q16620)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Ala 2 | - | expression tag |
| Gln 95 | Asn 95 | engineered mutation |
| Gln 121 | Asn 121 | engineered mutation |
| Gln 178 | Asn 178 | engineered mutation |
| Gln 241 | Asn 241 | conflict |
| Gln 280 | Asn 280 | engineered mutation |
| Ser 325 | Asn 325 | engineered mutation |
| Ala 384 | - | expression tag |
| Ala 385 | - | expression tag |
| Ala 386 | - | expression tag |
| His 387 | - | expression tag |
| His 388 | - | expression tag |
| His 389 | - | expression tag |
| His 390 | - | expression tag |
| His 391 | - | expression tag |
| His 392 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 114862.4 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1106.0 | |
| All* | Total formula weight | 116392.9 |






