30EW
XN-IL lectin from Xenorhabdus nematophila in complex with lactose
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (AAA, BBB, CCC, DDD, EEE...) | PA-I galactophilic lectin (PA-IL) (Galactose-binding lectin) | polymer | 125 | 13706.6 | 16 | UniProt (D3VE08) Pfam (PF07828) | Xenorhabdus nematophila | |
| 2 | AA, Q, R, S, T... (ggg, WWW, XXX, YYY, ZZZ...) | beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 342.3 | 9 | In PDB GlyTouCan (G84224TW) | |||
| 3 | V, Z (bbb, fff) | beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | branched | 342.3 | 2 | In PDB GlyTouCan (G88362QR) | |||
| 4 | BA, PA, RA, VA, VB (AAA, CCC, DDD, III) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 5 | AC, AD, BC, CA, CB... (JJJ, PPP, AAA, FFF, KKK...) | CALCIUM ION | non-polymer | 40.1 | 26 | Chemie (CA) PubChem (271) | |||
| 6 | BD, CC, EB, FA, FB... (PPP, JJJ, FFF, AAA, KKK...) | MAGNESIUM ION | non-polymer | 24.3 | 18 | Chemie (MG) PubChem (888) | |||
| 7 | AB, BB, DC, GA, HA... (EEE, JJJ, AAA, KKK, GGG...) | SULFATE ION | non-polymer | 96.1 | 19 | Chemie (SO4) | |||
| 8 | HB, JA, JC (GGG, BBB, LLL) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) PubChem (8117) | |||
| 9 | IB, KA, QC (GGG, BBB, NNN) | beta-D-glucopyranose | non-polymer | 180.2 | 3 | Chemie (BGC) PubChem (64689) | |||
| 10 | QA (CCC) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 11 | OB, ZC (GGG, OOO) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) PubChem (312) | |||
| 12 | PB (GGG) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) PubChem (923) | |||
| 13 | KC (LLL) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) PubChem (62551) | |||
| 14 | CD, DD, ED, FD, GD... (AAA, BBB, CCC, DDD, EEE...) | water | water | 18.0 | 1444 | Chemie (HOH) |
Sequence modifications
AAA, BBB, CCC, DDD, EEE, FFF, GGG, HHH, III, JJJ, KKK, LLL, MMM, NNN, OOO, PPP: 1 - 125 (UniProt: D3VE08)
| PDB | External Database | Details |
|---|---|---|
| Lys 11 | Arg 11 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 219305.0 | |
| Branched | Number of molecules | 11 |
| Total formula weight | 3765.3 | |
| Non-Polymers* | Number of molecules | 79 |
| Total formula weight | 4956.2 | |
| All* | Total formula weight | 228026.5 |
